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5ZOB

Crystal structure of zika ns3 protease with 4-guanidinomethyl-phenylacetyl-arg-arg-arg-4-amidinobenzylamide

PDB DOI: 10.2210/pdb5zob/pdb

Classification: HYDROLASE/HYDROLASE INHIBITOR
Organism(s): Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct

Deposited: 2018-04-12
Deposition Author(s): Phoo, W.W. , Wirawan, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

5zob
Literature

Crystal structure of zika ns3 protease with 4-guanidinomethyl-phenylacetyl-arg-arg-arg-4-amidinobenzylamide

Phoo, W.W. , Wirawan, M.

Primary Citation of Related Structures: 5ZOB


Proteins
Molecule Chains Sequence Length Organism Sequence
Serine protease subunit NS2B A 53 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct MTGKSVDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLVEEDGPPMRE
Serine protease subunit NS2B C 53 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct MTGKSVDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLVEEDGPPMRE
Serine protease subunit NS2B G 53 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct MTGKSVDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLVEEDGPPMRE
Serine protease subunit NS2B E 53 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct MTGKSVDMYIERAGDITWEKDAEVTGNSPRLDVALDESGDFSLVEEDGPPMRE
NS3 protease B 178 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct GSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGAALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGLSEVQLLAVPPGERAKNIQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGKREEETPVE
NS3 protease D 178 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct GSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGAALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGLSEVQLLAVPPGERAKNIQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGKREEETPVE
NS3 protease H 178 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct GSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGAALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGLSEVQLLAVPPGERAKNIQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGKREEETPVE
NS3 protease F 178 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct GSGALWDVPAPKEVKKGETTDGVYRVMTRRLLGSTQVGVGVMQEGVFHTMWHVTKGAALRSGEGRLDPYWGDVKQDLVSYCGPWKLDAAWDGLSEVQLLAVPPGERAKNIQTLPGIFKTKDGDIGAVALDYPAGTSGSPILDKCGRVIGLYGNGVVIKNGSYVSAITQGKREEETPVE
4-guanidinomethyl-phenylacetyl-Arg-Arg-Arg-4-amidinobenzylamide I 5 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct XRRRX
4-guanidinomethyl-phenylacetyl-Arg-Arg-Arg-4-amidinobenzylamide J 5 Zika Virus , Zika Virus (Strain Mr 766) , Synthetic Construct XRRRX
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-04-12
Deposition Author(s): Phoo, W.W. , Wirawan, M.