PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5ZJR

Structure of abdb/exd complex bound to a 'magenta14' dna sequence

PDB DOI: 10.2210/pdb5zjr/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Drosophila Melanogaster , Synthetic Construct

Deposited: 2018-03-22
Deposition Author(s): Baburajendran, N. , Honig, B. , Kaczynska, A. , Mann, R. , Palmer, A.G. , Shapiro, L. , Zeiske, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.03 Å

5zjr
Literature

Structure of abdb/exd complex bound to a 'magenta14' dna sequence

Baburajendran, N. , Honig, B. , Kaczynska, A. , Mann, R. , Palmer, A.G. , Shapiro, L. , Zeiske, T.

Primary Citation of Related Structures: 5ZJR


Proteins
Molecule Chains Sequence Length Organism Sequence
Homeobox protein abdominal-B A 84 Drosophila Melanogaster , Synthetic Construct VGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQ
Homeobox protein extradenticle B 74 Drosophila Melanogaster , Synthetic Construct DARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLY

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*TP*CP*GP*TP*AP*AP*AP*TP*CP*AP*TP*GP*C)-3') c 14 NA GTCGTAAATCATGC
DNA (5'-D(P*GP*CP*AP*TP*GP*AP*TP*TP*TP*AP*CP*GP*AP*C)-3') d 14 NA GCATGATTTACGAC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-03-22
Deposition Author(s): Baburajendran, N. , Honig, B. , Kaczynska, A. , Mann, R. , Palmer, A.G. , Shapiro, L. , Zeiske, T.