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FASTA Sequence PDB Format mmCIF Format
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5ZFU

Structure of the exbb/exbd hexameric complex (exbb6exbd3tm)

PDB DOI: 10.2210/pdb5zfu/pdb

Classification: TRANSPORT PROTEIN
Organism(s): Sphingobium Sp. (Strain Nbrc 103272 / Syk-6)

Deposited: 2018-03-07
Deposition Author(s): Maki-Yonekura, S. , Matsuoka, R. , Yamashita, Y. , Yonekura, K.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 6.7 Å

5zfu
Literature

Structure of the exbb/exbd hexameric complex (exbb6exbd3tm)

Maki-Yonekura, S. , Matsuoka, R. , Yamashita, Y. , Yonekura, K.

Primary Citation of Related Structures: 5ZFU


Proteins
Molecule Chains Sequence Length Organism Sequence
Biopolymer transport protein ExbB A 244 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG
Biopolymer transport protein ExbB B 244 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG
Biopolymer transport protein ExbB C 244 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG
Biopolymer transport protein ExbB D 244 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG
Biopolymer transport protein ExbB E 244 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG
Biopolymer transport protein ExbB F 244 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSKSVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLLNEAQNELELSEGSDDNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLLLQSRDLDLEASAAAHPVRVAQKLRAG
22-mer peptide from Biopolymer transport protein ExbD G 22 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) NVTPFIDVMLVLLIIFMVAAPL
22-mer peptide from Biopolymer transport protein ExbD H 22 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) NVTPFIDVMLVLLIIFMVAAPL
22-mer peptide from Biopolymer transport protein ExbD I 22 Sphingobium Sp. (Strain Nbrc 103272 / Syk-6) NVTPFIDVMLVLLIIFMVAAPL
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2018-03-07
Deposition Author(s): Maki-Yonekura, S. , Matsuoka, R. , Yamashita, Y. , Yonekura, K.