PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5Z9X

Arabidopsis small rna degrading nuclease 1 in complex with an rna substrate

PDB DOI: 10.2210/pdb5z9x/pdb

Classification: PLANT PROTEIN/RNA
Organism(s): Arabidopsis Thaliana , Synthetic Construct

Deposited: 2018-02-05
Deposition Author(s): Cao, C. , Chen, J. , Chen, X. , Gan, J. , Gu, J. , Huang, Y. , Liu, L. , Ma, J. , Ruan, W. , You, C. , Zhang, L.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.8 Å

5z9x
Literature

Arabidopsis small rna degrading nuclease 1 in complex with an rna substrate

Cao, C. , Chen, J. , Chen, X. , Gan, J. , Gu, J. , Huang, Y. , Liu, L. , Ma, J. , Ruan, W. , You, C. , Zhang, L.

Primary Citation of Related Structures: 5Z9X


Proteins
Molecule Chains Sequence Length Organism Sequence
Small RNA degrading nuclease 1 A 409 Arabidopsis Thaliana , Synthetic Construct MELKLATAEKQVLDELVKLLQSRDLRGENGNWKEFLHVYDKNADSPSDPSRRSHEDLVQFLTTFKKKEDLQLLKCHANHLLIENLKQESQDEDTPEQMLVRLTVEHPSYSLDYSFKPYSEDWFVSDVGMKMKKVMESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKYPNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEKRVDTTIKPSKEMLEVEKAKLFLHKIPNNVPSEELEQVLSGKFTLDVKQAKTQGRYYCAFALFHSSEDADQAFEHIDGIEMTDSLGLPQKVVIIKLSSGSRASIYVRKMVQDE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*GP*CP*CP*CP*AP*UP*UP*AP*G)-3') r 10 NA AGCCCAUUAG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2018-02-05
Deposition Author(s): Cao, C. , Chen, J. , Chen, X. , Gan, J. , Gu, J. , Huang, Y. , Liu, L. , Ma, J. , Ruan, W. , You, C. , Zhang, L.