5Z1B
Structure of bifidobacterium dentium beta-glucuronidase complexed with coumarin-3-o-glucuronide
PDB DOI: 10.2210/pdb5z1b/pdb
Classification: HYDROLASE Organism(s): Bifidobacterium Dentium Atcc 27679
Deposited: 2017-12-25 Deposition Author(s): Dashnyam, P. , Lin, C.H. , Lin, H.Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.45 Å
Structure of bifidobacterium dentium beta-glucuronidase complexed with coumarin-3-o-glucuronide
Dashnyam, P. , Lin, C.H. , Lin, H.Y.
Primary Citation of Related Structures: 5Z1B
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Glycosyl hydrolase family 2, TIM barrel domain protein | A | 692 | Bifidobacterium Dentium Atcc 27679 | MHHHHHHSSGVDLGTENLYFQSNGMLYPQSNDSRIVFPLDGVWDFRTAGEDSYPAEWADAPLPEPLPMAVPGSYNDQNDELNLRAHYGWVVYQRSFAVPSRLVAGQRMILRFDAATHAADVYLNGQLLGSHFGGFLPFEFDVTSALHAGENLLTVAVDNRIGSSTLPVGNDAGTAFMGSDNANVPAVAEAKKHARRQNLPNFDFFNFAGLNRHVELYTTPADAYIADIAITTERLDHIAGDACTAANALIAYDVTFGGDFPSNPTDPNTLIQPSDPAINHADPSESSESDIQRTATYGRQVRISILDGEGTVVAGVTADIERSGDGTAKASGEIAIRDAKLWNPGAAYLYTAVAELLPEGGAESSSRIIDAYRQTFGIRTVEVSGTTFLINGKPFYFKGFGKHEDSYFHGRGTDDVLNVKDVSLIHWLHANSFRTSHYPYAESMYDLCDREGIVIIDEVPAVGMSWLQYANPLVAERHREAIRGMIARDKNHPCIVMWSIANAPGLDGDGERPRQAYDYFRPLYELAHASDPQNRPVTLVCCQNDYTTDITERTMDVVCINRYYGWYNLSGDLDAACHALNIELDFWENIGKPVMFTEYGADTIEGIHGTHGEMFSEEFQRDYYARINAEIDKRPWFIGEQLWNFADFATFQGIIRVEGNRKGILTRDRQPKMAAHWLRERWAGIPDYGYKG |
| Glycosyl hydrolase family 2, TIM barrel domain protein | B | 692 | Bifidobacterium Dentium Atcc 27679 | MHHHHHHSSGVDLGTENLYFQSNGMLYPQSNDSRIVFPLDGVWDFRTAGEDSYPAEWADAPLPEPLPMAVPGSYNDQNDELNLRAHYGWVVYQRSFAVPSRLVAGQRMILRFDAATHAADVYLNGQLLGSHFGGFLPFEFDVTSALHAGENLLTVAVDNRIGSSTLPVGNDAGTAFMGSDNANVPAVAEAKKHARRQNLPNFDFFNFAGLNRHVELYTTPADAYIADIAITTERLDHIAGDACTAANALIAYDVTFGGDFPSNPTDPNTLIQPSDPAINHADPSESSESDIQRTATYGRQVRISILDGEGTVVAGVTADIERSGDGTAKASGEIAIRDAKLWNPGAAYLYTAVAELLPEGGAESSSRIIDAYRQTFGIRTVEVSGTTFLINGKPFYFKGFGKHEDSYFHGRGTDDVLNVKDVSLIHWLHANSFRTSHYPYAESMYDLCDREGIVIIDEVPAVGMSWLQYANPLVAERHREAIRGMIARDKNHPCIVMWSIANAPGLDGDGERPRQAYDYFRPLYELAHASDPQNRPVTLVCCQNDYTTDITERTMDVVCINRYYGWYNLSGDLDAACHALNIELDFWENIGKPVMFTEYGADTIEGIHGTHGEMFSEEFQRDYYARINAEIDKRPWFIGEQLWNFADFATFQGIIRVEGNRKGILTRDRQPKMAAHWLRERWAGIPDYGYKG |
| Glycosyl hydrolase family 2, TIM barrel domain protein | C | 692 | Bifidobacterium Dentium Atcc 27679 | MHHHHHHSSGVDLGTENLYFQSNGMLYPQSNDSRIVFPLDGVWDFRTAGEDSYPAEWADAPLPEPLPMAVPGSYNDQNDELNLRAHYGWVVYQRSFAVPSRLVAGQRMILRFDAATHAADVYLNGQLLGSHFGGFLPFEFDVTSALHAGENLLTVAVDNRIGSSTLPVGNDAGTAFMGSDNANVPAVAEAKKHARRQNLPNFDFFNFAGLNRHVELYTTPADAYIADIAITTERLDHIAGDACTAANALIAYDVTFGGDFPSNPTDPNTLIQPSDPAINHADPSESSESDIQRTATYGRQVRISILDGEGTVVAGVTADIERSGDGTAKASGEIAIRDAKLWNPGAAYLYTAVAELLPEGGAESSSRIIDAYRQTFGIRTVEVSGTTFLINGKPFYFKGFGKHEDSYFHGRGTDDVLNVKDVSLIHWLHANSFRTSHYPYAESMYDLCDREGIVIIDEVPAVGMSWLQYANPLVAERHREAIRGMIARDKNHPCIVMWSIANAPGLDGDGERPRQAYDYFRPLYELAHASDPQNRPVTLVCCQNDYTTDITERTMDVVCINRYYGWYNLSGDLDAACHALNIELDFWENIGKPVMFTEYGADTIEGIHGTHGEMFSEEFQRDYYARINAEIDKRPWFIGEQLWNFADFATFQGIIRVEGNRKGILTRDRQPKMAAHWLRERWAGIPDYGYKG |
| Glycosyl hydrolase family 2, TIM barrel domain protein | D | 692 | Bifidobacterium Dentium Atcc 27679 | MHHHHHHSSGVDLGTENLYFQSNGMLYPQSNDSRIVFPLDGVWDFRTAGEDSYPAEWADAPLPEPLPMAVPGSYNDQNDELNLRAHYGWVVYQRSFAVPSRLVAGQRMILRFDAATHAADVYLNGQLLGSHFGGFLPFEFDVTSALHAGENLLTVAVDNRIGSSTLPVGNDAGTAFMGSDNANVPAVAEAKKHARRQNLPNFDFFNFAGLNRHVELYTTPADAYIADIAITTERLDHIAGDACTAANALIAYDVTFGGDFPSNPTDPNTLIQPSDPAINHADPSESSESDIQRTATYGRQVRISILDGEGTVVAGVTADIERSGDGTAKASGEIAIRDAKLWNPGAAYLYTAVAELLPEGGAESSSRIIDAYRQTFGIRTVEVSGTTFLINGKPFYFKGFGKHEDSYFHGRGTDDVLNVKDVSLIHWLHANSFRTSHYPYAESMYDLCDREGIVIIDEVPAVGMSWLQYANPLVAERHREAIRGMIARDKNHPCIVMWSIANAPGLDGDGERPRQAYDYFRPLYELAHASDPQNRPVTLVCCQNDYTTDITERTMDVVCINRYYGWYNLSGDLDAACHALNIELDFWENIGKPVMFTEYGADTIEGIHGTHGEMFSEEFQRDYYARINAEIDKRPWFIGEQLWNFADFATFQGIIRVEGNRKGILTRDRQPKMAAHWLRERWAGIPDYGYKG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-12-25 Deposition Author(s): Dashnyam, P. , Lin, C.H. , Lin, H.Y.