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5Z00

Atval1 b3 domain in complex with 15bp-dna

PDB DOI: 10.2210/pdb5z00/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Arabidopsis Thaliana , Synthetic Construct

Deposited: 2017-12-17
Deposition Author(s): Wu, B.X. , Zhang, M.M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.587 Å

5z00
Literature

Atval1 b3 domain in complex with 15bp-dna

Wu, B.X. , Zhang, M.M.

Primary Citation of Related Structures: 5Z00


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3') a 15 NA AATTCTGCATGGATT
DNA (5'-D(*AP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3') e 15 NA AATTCTGCATGGATT
DNA (5'-D(*AP*AP*TP*TP*CP*TP*GP*CP*AP*TP*GP*GP*AP*TP*T)-3') i 15 NA AATTCTGCATGGATT
DNA (5'-D(*TP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*T)-3') b 15 NA TAATCCATGCAGAAT
DNA (5'-D(*TP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*T)-3') j 15 NA TAATCCATGCAGAAT
DNA (5'-D(*TP*AP*AP*TP*CP*CP*AP*TP*GP*CP*AP*GP*AP*AP*TP*T)-3') f 16 NA TAATCCATGCAGAATT

Proteins
Molecule Chains Sequence Length Organism Sequence
B3 domain-containing transcription repressor VAL1 C 128 Arabidopsis Thaliana , Synthetic Construct PKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGD
B3 domain-containing transcription repressor VAL1 G 128 Arabidopsis Thaliana , Synthetic Construct PKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGD
B3 domain-containing transcription repressor VAL1 K 128 Arabidopsis Thaliana , Synthetic Construct PKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGD
B3 domain-containing transcription repressor VAL1 M 128 Arabidopsis Thaliana , Synthetic Construct PKYTDKEVQQISGNLNLNIVPLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAANAGD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-12-17
Deposition Author(s): Wu, B.X. , Zhang, M.M.