5YZD
Crystal structure of the prefusion form of measles virus fusion protein in complex with a fusion inhibitor peptide (fip)
PDB DOI: 10.2210/pdb5yzd/pdb
Classification: VIRAL PROTEIN/INHIBITOR Organism(s): Measles Virus , Measles Virus (Strain Ichinose-B95A) , Synthetic Construct
Deposited: 2017-12-14 Deposition Author(s): Fukuda, Y. , Hashiguchi, T. , Kohda, D. , Kubota, M. , Kuroda, D. , Matsuoka, R. , Plemper, R.K. , Shirogane, Y. , Tsumoto, K. , Watanabe, S. , Yanagi, Y.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.636 Å
Crystal structure of the prefusion form of measles virus fusion protein in complex with a fusion inhibitor peptide (fip)
Fukuda, Y. , Hashiguchi, T. , Kohda, D. , Kubota, M. , Kuroda, D. , Matsuoka, R. , Plemper, R.K. , Shirogane, Y. , Tsumoto, K. , Watanabe, S. , Yanagi, Y.
Primary Citation of Related Structures: 5YZD
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| glycoprotein F2 | A | 94 | Measles Virus , Measles Virus (Strain Ichinose-B95A) , Synthetic Construct | GTPTGQIHWGNLSKIGVVGIGSASYKVMTRSSHQSLVIKLMPNITLLNNCTRVEIAEYRRLLRTVLEPIRDALNAMTQNIRPVQSVASSRRHKR |
| glycoprotein F1,measles virus fusion protein | C | 419 | Measles Virus , Measles Virus (Strain Ichinose-B95A) , Synthetic Construct | FAGVVLAGAALGVATAAQITAGIALHQSMLNSQAIDNLRASLETTNQAIEAIRQAGQEMILAVQGVQDYINNELIPSMNQLSCDLIGQKLGLKLLRYYTEILSLFGPSLRDPISAEISIQALSYALGGDINKVLEKLGYSGGDLLGILESRGIKARITHVDTESYFIVLSIAYPTLSEIKGVIVHRLEGVSYNIGSQEWYTTVPKYVATQGYLISNFDESSCTFMPEGTVCSQNALYPMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTIINQDPDKILTYIAADHCPVVEVNGVTIQVGSRRYPDAVYLHRIDLGPPISLERLDVGTNLGNAIAKLEDAKELLESSDQCCRSMKGCCSTSLEGIEGRAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK |
| peptide CBZ-DPN-PHE-GLY | B | 4 | Measles Virus , Measles Virus (Strain Ichinose-B95A) , Synthetic Construct | XFFG |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-12-14 Deposition Author(s): Fukuda, Y. , Hashiguchi, T. , Kohda, D. , Kubota, M. , Kuroda, D. , Matsuoka, R. , Plemper, R.K. , Shirogane, Y. , Tsumoto, K. , Watanabe, S. , Yanagi, Y.