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FASTA Sequence PDB Format mmCIF Format
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5YXY

Crystal structure of the hyhl-hypa complex (form i)

PDB DOI: 10.2210/pdb5yxy/pdb

Classification: METAL BINDING PROTEIN
Organism(s): Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1)

Deposited: 2017-12-07
Deposition Author(s): Kwon, S. , Miki, K. , Nishitani, Y. , Watanabe, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.299 Å

5yxy
Literature

Crystal structure of the hyhl-hypa complex (form i)

Kwon, S. , Miki, K. , Nishitani, Y. , Watanabe, S.

Primary Citation of Related Structures: 5YXY


Proteins
Molecule Chains Sequence Length Organism Sequence
Cytosolic NiFe-hydrogenase, alpha subunit A 428 Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1) MKNVYLPITVDHIARVEGKGGVEIVVGDDGVKEVKLNIIEGPRFFEAITLGKKLDEALAIYPRICSFCSAAHKLTAVEAAEKAIGFTPREEIQALREVLYIGDMIESHALHLYLLVLPDYLGYSGPLHMIDEYKKEMSIALDLKNLGSWMMDELGSRAIHQENAVLGGFGKLPDKSVLENMKRRLKEALPKAEYTFELFTKLEQYEEVEGPITHIAVKPRNGVYGIYGDYLKASDGNEFPSEEYREHIKEFVVEHSFAKHSHYHGKPFMVGAISRLVNNADTLYGRAKELYESYKDLLRSTNPFANNLAQALELVYFTERAIDLIDEALAKWPIRPRDEVALKDGFGVSTTEAPRGVLVYALKVENGRVSYADIITPTAFNLAMMEQHVRMMAEKHYNDDPEKLKLLAEMVVRAYDPCISCSVHVARL
Cytosolic NiFe-hydrogenase, alpha subunit B 428 Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1) MKNVYLPITVDHIARVEGKGGVEIVVGDDGVKEVKLNIIEGPRFFEAITLGKKLDEALAIYPRICSFCSAAHKLTAVEAAEKAIGFTPREEIQALREVLYIGDMIESHALHLYLLVLPDYLGYSGPLHMIDEYKKEMSIALDLKNLGSWMMDELGSRAIHQENAVLGGFGKLPDKSVLENMKRRLKEALPKAEYTFELFTKLEQYEEVEGPITHIAVKPRNGVYGIYGDYLKASDGNEFPSEEYREHIKEFVVEHSFAKHSHYHGKPFMVGAISRLVNNADTLYGRAKELYESYKDLLRSTNPFANNLAQALELVYFTERAIDLIDEALAKWPIRPRDEVALKDGFGVSTTEAPRGVLVYALKVENGRVSYADIITPTAFNLAMMEQHVRMMAEKHYNDDPEKLKLLAEMVVRAYDPCISCSVHVARL
Cytosolic NiFe-hydrogenase, alpha subunit C 428 Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1) MKNVYLPITVDHIARVEGKGGVEIVVGDDGVKEVKLNIIEGPRFFEAITLGKKLDEALAIYPRICSFCSAAHKLTAVEAAEKAIGFTPREEIQALREVLYIGDMIESHALHLYLLVLPDYLGYSGPLHMIDEYKKEMSIALDLKNLGSWMMDELGSRAIHQENAVLGGFGKLPDKSVLENMKRRLKEALPKAEYTFELFTKLEQYEEVEGPITHIAVKPRNGVYGIYGDYLKASDGNEFPSEEYREHIKEFVVEHSFAKHSHYHGKPFMVGAISRLVNNADTLYGRAKELYESYKDLLRSTNPFANNLAQALELVYFTERAIDLIDEALAKWPIRPRDEVALKDGFGVSTTEAPRGVLVYALKVENGRVSYADIITPTAFNLAMMEQHVRMMAEKHYNDDPEKLKLLAEMVVRAYDPCISCSVHVARL
Probable hydrogenase nickel incorporation protein HypA D 139 Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1) MHEWALADAIVRTVLDYAQREGASRVKAVRVVLGELQDVAEDIVKFAMEQLFAGTIAEGAEIEFVEEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDFEVVKGRGVYVAGIKIEKEGGS
Probable hydrogenase nickel incorporation protein HypA E 139 Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1) MHEWALADAIVRTVLDYAQREGASRVKAVRVVLGELQDVAEDIVKFAMEQLFAGTIAEGAEIEFVEEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDFEVVKGRGVYVAGIKIEKEGGS
Probable hydrogenase nickel incorporation protein HypA F 139 Thermococcus Kodakarensis (Strain Atcc Baa-918 / Jcm 12380 / Kod1) MHEWALADAIVRTVLDYAQREGASRVKAVRVVLGELQDVAEDIVKFAMEQLFAGTIAEGAEIEFVEEEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDFEVVKGRGVYVAGIKIEKEGGS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-12-07
Deposition Author(s): Kwon, S. , Miki, K. , Nishitani, Y. , Watanabe, S.