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5YU3

Structural basis for recognition of l-lysine, l-ornithine, and l-2,4-diamino butyric acid by lysine cyclodeaminase

PDB DOI: 10.2210/pdb5yu3/pdb

Classification: LYASE
Organism(s): Streptomyces Pristinaespiralis

Deposited: 2017-11-20
Deposition Author(s): Kim, Y.H. , Lee, H.H. , Matsuura, A. , Min, K.J. , Yoon, H.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.79 Å

5yu3
Literature

Structural basis for recognition of l-lysine, l-ornithine, and l-2,4-diamino butyric acid by lysine cyclodeaminase

Kim, Y.H. , Lee, H.H. , Matsuura, A. , Min, K.J. , Yoon, H.J.

Primary Citation of Related Structures: 5YU3


Proteins
Molecule Chains Sequence Length Organism Sequence
Lysine cyclodeaminase A 344 Streptomyces Pristinaespiralis METWVLGRRDVAEVVAAVGRDELMRRIIDRLTGGLAEIGRGERHLSPLRGGLERSEPVPGIWEWMPHREPGDHITLKTVGYSPANPARFGLPTILGTVARYDDTTGALTALMDGVLLTALRTGAASAVASRLLARPDSHTLGLIGTGAQAVTQLHALSLVLPLQRALVWDTDPAHRESFARRAAFTGVSVEIAEPARIAAEADVISTATSVAVGQGPVLPDTGVREHLHINAVGADLVGKTELPLGLLERAFVTADHPEQALREGECQQLSADRLGPQLAHLCADPAAAAGRQDTLSVFDSTGFAFEDALAMEVFLEAAAERDLGIRVGIEHHPGDALDPYALQ
Lysine cyclodeaminase B 344 Streptomyces Pristinaespiralis METWVLGRRDVAEVVAAVGRDELMRRIIDRLTGGLAEIGRGERHLSPLRGGLERSEPVPGIWEWMPHREPGDHITLKTVGYSPANPARFGLPTILGTVARYDDTTGALTALMDGVLLTALRTGAASAVASRLLARPDSHTLGLIGTGAQAVTQLHALSLVLPLQRALVWDTDPAHRESFARRAAFTGVSVEIAEPARIAAEADVISTATSVAVGQGPVLPDTGVREHLHINAVGADLVGKTELPLGLLERAFVTADHPEQALREGECQQLSADRLGPQLAHLCADPAAAAGRQDTLSVFDSTGFAFEDALAMEVFLEAAAERDLGIRVGIEHHPGDALDPYALQ
Lysine cyclodeaminase C 344 Streptomyces Pristinaespiralis METWVLGRRDVAEVVAAVGRDELMRRIIDRLTGGLAEIGRGERHLSPLRGGLERSEPVPGIWEWMPHREPGDHITLKTVGYSPANPARFGLPTILGTVARYDDTTGALTALMDGVLLTALRTGAASAVASRLLARPDSHTLGLIGTGAQAVTQLHALSLVLPLQRALVWDTDPAHRESFARRAAFTGVSVEIAEPARIAAEADVISTATSVAVGQGPVLPDTGVREHLHINAVGADLVGKTELPLGLLERAFVTADHPEQALREGECQQLSADRLGPQLAHLCADPAAAAGRQDTLSVFDSTGFAFEDALAMEVFLEAAAERDLGIRVGIEHHPGDALDPYALQ
Lysine cyclodeaminase D 344 Streptomyces Pristinaespiralis METWVLGRRDVAEVVAAVGRDELMRRIIDRLTGGLAEIGRGERHLSPLRGGLERSEPVPGIWEWMPHREPGDHITLKTVGYSPANPARFGLPTILGTVARYDDTTGALTALMDGVLLTALRTGAASAVASRLLARPDSHTLGLIGTGAQAVTQLHALSLVLPLQRALVWDTDPAHRESFARRAAFTGVSVEIAEPARIAAEADVISTATSVAVGQGPVLPDTGVREHLHINAVGADLVGKTELPLGLLERAFVTADHPEQALREGECQQLSADRLGPQLAHLCADPAAAAGRQDTLSVFDSTGFAFEDALAMEVFLEAAAERDLGIRVGIEHHPGDALDPYALQ
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-11-20
Deposition Author(s): Kim, Y.H. , Lee, H.H. , Matsuura, A. , Min, K.J. , Yoon, H.J.