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5YTG

Structure of large fragment of dna polymerase i from thermus aquaticus host-guest complex with the unnatural base i-fc pair with da

PDB DOI: 10.2210/pdb5ytg/pdb

Classification: TRANSFERASE/DNA
Organism(s): Cutibacterium Acnes Hl110Pa4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-11-17
Deposition Author(s): Gao, Y.Q. , Mondal, M. , Song, R.Y. , Xia, B. , Yi, C.Q. , Zeng, H. , Zhang, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.07 Å

Literature

Structure of large fragment of dna polymerase i from thermus aquaticus host-guest complex with the unnatural base i-fc pair with da

Gao, Y.Q. , Mondal, M. , Song, R.Y. , Xia, B. , Yi, C.Q. , Zeng, H. , Zhang, J.

Primary Citation of Related Structures: 5YTG


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase I, thermostable A 539 Cutibacterium Acnes Hl110Pa4 , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) LEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3') b 12 NA GACCACGGCGCC
DNA (5'-D(*AP*AP*AP*CP*GP*GP*CP*GP*CP*CP*GP*(94O)P*GP*GP*TP*C)-3') c 16 NA AAACGGCGCCGXGGTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-11-17
Deposition Author(s): Gao, Y.Q. , Mondal, M. , Song, R.Y. , Xia, B. , Yi, C.Q. , Zeng, H. , Zhang, J.