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5YMV

Crystal structure of 9-mer peptide from influenza virus in complex with bf2*1201

PDB DOI: 10.2210/pdb5ymv/pdb

Classification: IMMUNE SYSTEM
Organism(s): Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-10-22
Deposition Author(s): Chai, Y. , Gao, G.F. , Liu, W.J. , Qi, J. , Xiang, W. , Xiao, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.197 Å

5ymv
Literature

Crystal structure of 9-mer peptide from influenza virus in complex with bf2*1201

Chai, Y. , Gao, G.F. , Liu, W.J. , Qi, J. , Xiang, W. , Xiao, J.

Primary Citation of Related Structures: 5YMV


Proteins
Molecule Chains Sequence Length Organism Sequence
Class I histocompatibility antigen, F10 alpha chain A 271 Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MELHTLRYIQTAMTDPGPGQPWFVTVGYVDGELFVHYNSTARRYVPRTEWIAAKADQQYWDGQTQIGQGNEQIDRENLGILQRRYNQTGGSHTVQWMYGCDILEGGPIRGYYQMAYDGRDFTAFDKGTMTFTAAVPEAVPTKRKWEEESEPERWKNYLEETCVEWLRRYVEYGKAELGRRERPEVRVWGKEADGILTLSCRAHGFYPRPIVVSWLKDGAVRGQDAHSGGIVPNGDGTYHTWVTIDAQPGDGDKYQCRVEHASLPQPGLYSW
Class I histocompatibility antigen, F10 alpha chain D 271 Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MELHTLRYIQTAMTDPGPGQPWFVTVGYVDGELFVHYNSTARRYVPRTEWIAAKADQQYWDGQTQIGQGNEQIDRENLGILQRRYNQTGGSHTVQWMYGCDILEGGPIRGYYQMAYDGRDFTAFDKGTMTFTAAVPEAVPTKRKWEEESEPERWKNYLEETCVEWLRRYVEYGKAELGRRERPEVRVWGKEADGILTLSCRAHGFYPRPIVVSWLKDGAVRGQDAHSGGIVPNGDGTYHTWVTIDAQPGDGDKYQCRVEHASLPQPGLYSW
Beta-2-microglobulin B 98 Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) DLTPKVQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWTFQRLVHADFTPSSGSTYACKVEHETLKEPQVYKWDPEF
Beta-2-microglobulin E 98 Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) DLTPKVQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWTFQRLVHADFTPSSGSTYACKVEHETLKEPQVYKWDPEF
ALA-VAL-LYS-GLY-VAL-GLY-THR-MET-VAL C 9 Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) AVKGVGTMV
ALA-VAL-LYS-GLY-VAL-GLY-THR-MET-VAL F 9 Caldanaerobius , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) AVKGVGTMV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-10-22
Deposition Author(s): Chai, Y. , Gao, G.F. , Liu, W.J. , Qi, J. , Xiang, W. , Xiao, J.