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5YEH

Crystal structure of ctcf zfs4-8-ecbs

PDB DOI: 10.2210/pdb5yeh/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2017-09-17
Deposition Author(s): Li, X. , Wang, J. , Wang, M. , Wang, Y. , Yin, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.328 Å

5yeh
Literature

Crystal structure of ctcf zfs4-8-ecbs

Li, X. , Wang, J. , Wang, M. , Wang, Y. , Yin, M.

Primary Citation of Related Structures: 5YEH


Proteins
Molecule Chains Sequence Length Organism Sequence
Transcriptional repressor CTCF A 142 Homo Sapiens , Synthetic Construct KPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHK
Transcriptional repressor CTCF B 142 Homo Sapiens , Synthetic Construct KPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHK

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*CP*CP*GP*CP*TP*AP*GP*AP*GP*GP*GP*CP*G)-3') c 20 NA ACGGTTTCCGCTAGAGGGCG
DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*CP*CP*GP*CP*TP*AP*GP*AP*GP*GP*GP*CP*G)-3') e 20 NA ACGGTTTCCGCTAGAGGGCG
DNA (5'-D(*TP*CP*GP*CP*CP*CP*TP*CP*TP*AP*GP*CP*GP*GP*AP*AP*AP*CP*CP*G)-3') d 20 NA TCGCCCTCTAGCGGAAACCG
DNA (5'-D(*TP*CP*GP*CP*CP*CP*TP*CP*TP*AP*GP*CP*GP*GP*AP*AP*AP*CP*CP*G)-3') f 20 NA TCGCCCTCTAGCGGAAACCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-09-17
Deposition Author(s): Li, X. , Wang, J. , Wang, M. , Wang, Y. , Yin, M.