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5YDT

Remodeled utp30 in 90s pre-ribosome (mtr4-depleted, enp1-tap)

PDB DOI: 10.2210/pdb5ydt/pdb

Classification: RIBOSOME
Organism(s): Grouper Iridovirus , Pseudomonas Chlororaphis Subsp. Piscium , Burkholderia Vietnamiensis (Strain G4 / Lmg 22486)

Deposited: 2017-09-14
Deposition Author(s): Hu, J. , Ye, K. , Zhu, X.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.5 Å

5ydt
Literature

Remodeled utp30 in 90s pre-ribosome (mtr4-depleted, enp1-tap)

Hu, J. , Ye, K. , Zhu, X.

Primary Citation of Related Structures: 5YDT


Proteins
Molecule Chains Sequence Length Organism Sequence
Ribosome biogenesis protein UTP30 U5 274 Grouper Iridovirus , Pseudomonas Chlororaphis Subsp. Piscium , Burkholderia Vietnamiensis (Strain G4 / Lmg 22486) MVESNDIIKSGLAEKALKALILQCEENPSLKNDKDIHIIINTGKKMGINRDNIPRIIPLTKYKLFKPRDLNILLITKDPSALYRETLTKDEHTSELFKEIISVKNLRRRFKGSKLTQLYKDFDLVVADYRVHHLLPEVLGSRFYHGSKKLPYMIRMSKEVKLKRQQMVEKCDPIYVRAQLRSICKNTSYIPNNDNCLSVRVGYIQKHSIPEILQNIQDTINFLTDKSKRPQGGVIKGGIISIFVKTSNSTSLPIYQFSEARENQKNEDLSDIKL
Unassigned helices UC 34 Grouper Iridovirus , Pseudomonas Chlororaphis Subsp. Piscium , Burkholderia Vietnamiensis (Strain G4 / Lmg 22486) XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
Saccharomyces cerevisiae strain ALI 308 18S ribosomal RNA gene, partial sequence sa 64 NA GACGGAGCCAGCGAGUCUAACCUUGGCCGAGAGGUCUUGGUAAUCUUGUGAAACUCCGUCGUGC
5' ETS RNA 5a 19 NA UGGGCAUCUUGCGAUUCCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2017-09-14
Deposition Author(s): Hu, J. , Ye, K. , Zhu, X.