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5YD3

Crystal structure of the scfv antibody 4b08 with epitope peptide

PDB DOI: 10.2210/pdb5yd3/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2017-09-11
Deposition Author(s): Caaveiro, J.M.M. , Miyanabe, K. , Tsumoto, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.35 Å

5yd3
Literature

Crystal structure of the scfv antibody 4b08 with epitope peptide

Caaveiro, J.M.M. , Miyanabe, K. , Tsumoto, K.

Primary Citation of Related Structures: 5YD3


Proteins
Molecule Chains Sequence Length Organism Sequence
scFv 4B08 A 251 Mus Musculus , Synthetic Construct EVQLQQSGAELVRPGTSVKMSCKAAGYTFTKYWIGWVKQRPGHGLEWIGDIHPGSFYSNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYCARDYYTNYGDWGQGTSVTVSSAGGGGSGGGGSGGGGSGGGGSDIVMTQAAPSVSVTPGESVSISCRSSKSLLHRNGNTYLFWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCMQHLEYPYTFGSGTKLELKV
scFv 4B08 C 251 Mus Musculus , Synthetic Construct EVQLQQSGAELVRPGTSVKMSCKAAGYTFTKYWIGWVKQRPGHGLEWIGDIHPGSFYSNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYCARDYYTNYGDWGQGTSVTVSSAGGGGSGGGGSGGGGSGGGGSDIVMTQAAPSVSVTPGESVSISCRSSKSLLHRNGNTYLFWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCMQHLEYPYTFGSGTKLELKV
scFv 4B08 E 251 Mus Musculus , Synthetic Construct EVQLQQSGAELVRPGTSVKMSCKAAGYTFTKYWIGWVKQRPGHGLEWIGDIHPGSFYSNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYCARDYYTNYGDWGQGTSVTVSSAGGGGSGGGGSGGGGSGGGGSDIVMTQAAPSVSVTPGESVSISCRSSKSLLHRNGNTYLFWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCMQHLEYPYTFGSGTKLELKV
scFv 4B08 G 251 Mus Musculus , Synthetic Construct EVQLQQSGAELVRPGTSVKMSCKAAGYTFTKYWIGWVKQRPGHGLEWIGDIHPGSFYSNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAIYYCARDYYTNYGDWGQGTSVTVSSAGGGGSGGGGSGGGGSGGGGSDIVMTQAAPSVSVTPGESVSISCRSSKSLLHRNGNTYLFWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLRISRVEAEDVGVYYCMQHLEYPYTFGSGTKLELKV
Epitope peptide B 9 Mus Musculus , Synthetic Construct DINYYTSEP
Epitope peptide D 9 Mus Musculus , Synthetic Construct DINYYTSEP
Epitope peptide F 9 Mus Musculus , Synthetic Construct DINYYTSEP
Epitope peptide H 9 Mus Musculus , Synthetic Construct DINYYTSEP
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-09-11
Deposition Author(s): Caaveiro, J.M.M. , Miyanabe, K. , Tsumoto, K.