5Y4N
Crystal structure of aerobically purified and anaerobically crystallized d. vulgaris miyazaki f [nife]-hydrogenase
PDB DOI: 10.2210/pdb5y4n/pdb
Classification: OXIDOREDUCTASE Organism(s): Desulfovibrio Vulgaris (Strain Miyazaki F / Dsm 19637)
Deposited: 2017-08-04 Deposition Author(s): Higuchi, Y. , Hiromoto, T. , Mochida, S. , Nishikawa, K. , Shibata, N.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 1.69 Å
Crystal structure of aerobically purified and anaerobically crystallized d. vulgaris miyazaki f [nife]-hydrogenase
Higuchi, Y. , Hiromoto, T. , Mochida, S. , Nishikawa, K. , Shibata, N.
Primary Citation of Related Structures: 5Y4N
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Periplasmic [NiFe] hydrogenase small subunit | S | 267 | Desulfovibrio Vulgaris (Strain Miyazaki F / Dsm 19637) | LMGPRRPSVVYLHNAECTGCSESVLRAFEPYIDTLILDTLSLDYHETIMAAAGDAAEAALEQAVNSPHGFIAVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGTCATFGGVQAAKPNPTGAKGVNDALKHLGVKAINIAGCPPNPYNLVGTIVYYLKNKAAPELDSLNRPTMFFGQTVHEQCPRLPHFDAGEFAPSFESEEARKGWCLYELGCKGPVTMNNCPKIKFNQTNWPVDAGHPCIGCSEPDFWDAMTPFYQN |
| Periplasmic [NiFe] hydrogenase large subunit | L | 552 | Desulfovibrio Vulgaris (Strain Miyazaki F / Dsm 19637) | MSGCRAQNAPGGIPVTPKSSYSGPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCGVCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVESGQLGPFTNAYFLGGHPAYYLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAEFEALWKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIEEHVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRYMGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGPEALFSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVGFVNAPRGGLSHWIRIEDGKIGNFQLVVPSTWTLGPRCDKNKLSPVEASLIGTPVADAKRPVEILRTVHSFDPCIACGVH |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-08-04 Deposition Author(s): Higuchi, Y. , Hiromoto, T. , Mochida, S. , Nishikawa, K. , Shibata, N.