Crystal structure of a group 2 ha binding antibody af4h1k1 fab in complex with the 1968 h3n2 pandemic (h3-ac/68) hemagglutinin
PDB DOI: 10.2210/pdb5y2l/pdb
Classification: ANTIMICROBIAL PROTEIN Organism(s): Homo Sapiens , Influenza A Virus (Strain A/Aichi/2/1968 H3N2)
Deposited: 2017-07-26 Deposition Author(s): Gao, F.G. , Qi, J. , Xiao, H.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Hemagglutinin | A | 329 | Homo Sapiens , Influenza A Virus (Strain A/Aichi/2/1968 H3N2) | QDLPGNDNSTATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNETWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVTQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGIHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQTR |
Hemagglutinin | B | 176 | Homo Sapiens , Influenza A Virus (Strain A/Aichi/2/1968 H3N2) | GLFGAIAGFIENGWEGMIDGWYGFRHQNSEGTGQAADLKSTQAAIDQINGKLNRVIEKTNEKFHQIEKEFSEVEGRIQDLEKYVEDTKIDLWSYNAELLVALENQHTIDLTDSEMNKLFEKTRRQLRENAEEMGNGCFKIYHKCDNACIESIRNGTYDHDVYRDEALNNRFQIKGV |
a group 2 HA binding antibody AF4H1K1 Fab heavy chain | I | 233 | Homo Sapiens , Influenza A Virus (Strain A/Aichi/2/1968 H3N2) | QVQLVESGGGVVQPGTSLRLSCEASGFTSSAYAMHWVRQAPGKGLEWVAVITFDGGYQYYADSVKGRFTISRDISRNTLHLHMNSLRAEDTAVYYCARDPLTKLLPFDWVSGGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK |
a group 2 HA binding antibody AF4H1K1 Fab light chain | J | 220 | Homo Sapiens , Influenza A Virus (Strain A/Aichi/2/1968 H3N2) | DIVMTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYRASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECHHHHHH |
Method: X-RAY DIFFRACTION