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5XVO

E. fae cas1-cas2/prespacer/target ternary complex revealing dna sampling and half-integration states

PDB DOI: 10.2210/pdb5xvo/pdb

Classification: IMMUNE SYSTEM
Organism(s): Enterococcus Faecalis Tx0027 , Synthetic Construct

Deposited: 2017-06-28
Deposition Author(s): Ke, A. , Nam, K.H. , Ng, S. , Xiao, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

5xvo
Literature

E. fae cas1-cas2/prespacer/target ternary complex revealing dna sampling and half-integration states

Ke, A. , Nam, K.H. , Ng, S. , Xiao, Y.

Primary Citation of Related Structures: 5XVO


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas1 A 288 Enterococcus Faecalis Tx0027 , Synthetic Construct MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
CRISPR-associated endonuclease Cas1 B 288 Enterococcus Faecalis Tx0027 , Synthetic Construct MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
CRISPR-associated endonuclease Cas1 C 288 Enterococcus Faecalis Tx0027 , Synthetic Construct MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
CRISPR-associated endonuclease Cas1 D 288 Enterococcus Faecalis Tx0027 , Synthetic Construct MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
CRISPR-associated endonuclease Cas1 I 288 Enterococcus Faecalis Tx0027 , Synthetic Construct MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
CRISPR-associated endonuclease Cas1 J 288 Enterococcus Faecalis Tx0027 , Synthetic Construct MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
CRISPR-associated endonuclease Cas1 K 288 Enterococcus Faecalis Tx0027 , Synthetic Construct MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
CRISPR-associated endonuclease Cas1 L 288 Enterococcus Faecalis Tx0027 , Synthetic Construct MGWRTVVVNKHSKLSYKNNHLVFKAIDHQELIHLSEIDVLLLETTDISLTTMLLKRLIDEKILVLFCDDKRLPIGKILPFYGRHDSSLQLTRQLAWTEERKGQVWTAIIAQKITNQSLHLAQRDYGQKAAALLAMRAELRLFDPANREGHAARSYFNTLFGNDFTREQENDINAGLNYGYTLLLSIFARELVQTGCFTQLGLKHANQFNDFNLASDLMEPFRPLVDQIIYENRKEAFPIMKRKLFALFMNTYMYKKKQMFLTNIATDYTKHVVKVLNQEEEGVPEFGI
CRISPR-associated endoribonuclease Cas2 E 109 Enterococcus Faecalis Tx0027 , Synthetic Construct MSYRYMRLLLMFDMPTDTASDRKAYRKFRKFLINEGFIMHQFSVYSKILLNDTANKAMLARLKQNNPQRGLITLLNVTEKQFSRMIYLHGEQDNRVANSDERIVFLGEE
CRISPR-associated endoribonuclease Cas2 F 109 Enterococcus Faecalis Tx0027 , Synthetic Construct MSYRYMRLLLMFDMPTDTASDRKAYRKFRKFLINEGFIMHQFSVYSKILLNDTANKAMLARLKQNNPQRGLITLLNVTEKQFSRMIYLHGEQDNRVANSDERIVFLGEE
CRISPR-associated endoribonuclease Cas2 M 109 Enterococcus Faecalis Tx0027 , Synthetic Construct MSYRYMRLLLMFDMPTDTASDRKAYRKFRKFLINEGFIMHQFSVYSKILLNDTANKAMLARLKQNNPQRGLITLLNVTEKQFSRMIYLHGEQDNRVANSDERIVFLGEE
CRISPR-associated endoribonuclease Cas2 N 109 Enterococcus Faecalis Tx0027 , Synthetic Construct MSYRYMRLLLMFDMPTDTASDRKAYRKFRKFLINEGFIMHQFSVYSKILLNDTANKAMLARLKQNNPQRGLITLLNVTEKQFSRMIYLHGEQDNRVANSDERIVFLGEE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (28-MER) g 28 NA TTCGTAGCTGAGGCCTCAGCTACGTTCC
DNA (28-MER) o 28 NA TTCGTAGCTGAGGCCTCAGCTACGTTCC
DNA (28-MER) p 28 NA TTCGTAGCTGAGGCCTCAGCTACGTTCC
DNA (5'-D(P*CP*CP*GP*AP*G)-3') h 5 NA CCGAG
DNA (46-MER) q 46 NA CCGAGGTTTTGGTACCATTCTAAACAACATGACTCTAAAACCTCGG
DNA (69-MER) r 69 NA TTCGTAGCTGAGGCCTCAGCTACGTTCCGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACCTCGG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-06-28
Deposition Author(s): Ke, A. , Nam, K.H. , Ng, S. , Xiao, Y.