Structure of coxsackievirus a6 (cva6) virus a-particle in complex with the neutralizing antibody fragment 1d5
PDB DOI: 10.2210/pdb5xs7/pdb
Classification: VIRUS Organism(s): Coxsackievirus A6 , Mus Musculus
Deposited: 2017-06-12 Deposition Author(s): Cheng, T. , He, M.Z. , Li, S.W. , Xu, L.F. , Yu, H. , Zheng, Q.B.
Proteins | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Sequence |
Light chain of Fab 1D5 | L | 108 | Coxsackievirus A6 , Mus Musculus | DIVMTQSHKFMSTSVGDRVSITCKASQDVNTAVAWYQQRPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFTFTISSVQAEDLAVYYCQQHYTTPHTFGGGTKLEIKR |
Heavy chain of Fab 1D5 | H | 119 | Coxsackievirus A6 , Mus Musculus | EVQLVESGGGLVKPGGSLKLSCAASGFAFSTYDMSWVRQTPEKRLELVAHISSGGGYIYYPDTVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRQKGLYYGFDYWGQGTTLTVSS |
Genome polyprotein | A | 305 | Coxsackievirus A6 , Mus Musculus | NDPIANAVESAVSALADTTISRVTAANTTASTHSLGTGRVPALQAAETGASSNASDENLVETRCVMNRNGVNEASVEHFYSRAGLVGVVEVKDSGTSLDGYTVWPIDVMGFVQQRRKLELSTYMRFDAEFTFVSNLSNSTTPGMLLQYMYVPPGAPKPDGRKSYQWQTATNPSVFAKLSDPPPQVSVPFMSPATAYQWFYDGYPTFGEHKQATNLQYGQCPNNMMGHFAIRTVSESTTGKNVHVRVYMRIKHVRAWVPRPLRSQAYMVKNYPTYSQTITNTATDRASITTTDYEGGVPASPQRTS |
Genome polyprotein | B | 256 | Coxsackievirus A6 , Mus Musculus | SPSVEACGYSDRVAQLTVGNSTITTQEAANIVLSYGEWPEYCPSTDATAVDKPTRPDVSVNRFYTLSTKSWKTESTGWYWKFPDVLNDTGVFGQNAQFHYLYRSGFCMHVQCNASKFHQGALLVAAIPEFVIAASSPATKPNGRGLYPDFAHTNPGKDGQEFRDPYVLDAGIPLSQALVFPHQWINLRTNNCATIIMPYVNALPFDSALNHSNFGLVVIPISPLKYCNGATTEVPVTLTIAPLNSEFSGLRQAIKQ |
Genome polyprotein | C | 240 | Coxsackievirus A6 , Mus Musculus | GFPTELKPGTNQFLTTDDGTSPPILPGFEPTPLIHIPGEFTSLLDLCQIETILEVNNTTGTIGVSRLLIPVRAQNNVDQLCASFQVDPGRNGPWQSTMVGQICRYYTQWSGSLKVTFMFTGSFMATGKMLIAYTPPGSAQPATREAAMLGTHIVWDFGLQSSVTLVIPWISNTHFRAVKIGGVYDYYATGIVTIWYQTNFVVPPDTPTEANIIALGAAQKNFTLKLCKDTDEIQQTAAYQ |
Method: ELECTRON MICROSCOPY