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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5XQG

Crystal structure of a pl 26 exo-rhamnogalacturonan lyase from penicillium chrysogenum complexed with unsaturated galacturonosyl rhamnose

PDB DOI: 10.2210/pdb5xqg/pdb

Classification: LYASE
Organism(s): Penicillium Chrysogenum

Deposited: 2017-06-07
Deposition Author(s): Iwai, M. , Kunishige, Y. , Nishimura, S. , Sakamoto, T. , Tada, T.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.74 Å

5xqg
Literature

Crystal structure of a pl 26 exo-rhamnogalacturonan lyase from penicillium chrysogenum complexed with unsaturated galacturonosyl rhamnose

Iwai, M. , Kunishige, Y. , Nishimura, S. , Sakamoto, T. , Tada, T.

Primary Citation of Related Structures: 5XQG


Proteins
Molecule Chains Sequence Length Organism Sequence
Pcrglx protein A 906 Penicillium Chrysogenum FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVKSSSSSSESSAPNSSIVVTDNSDALTVNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAHSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
Pcrglx protein B 906 Penicillium Chrysogenum FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVKSSSSSSESSAPNSSIVVTDNSDALTVNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAHSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
Pcrglx protein C 906 Penicillium Chrysogenum FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVKSSSSSSESSAPNSSIVVTDNSDALTVNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAHSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
Pcrglx protein D 906 Penicillium Chrysogenum FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVKSSSSSSESSAPNSSIVVTDNSDALTVNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAHSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
Pcrglx protein E 906 Penicillium Chrysogenum FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVKSSSSSSESSAPNSSIVVTDNSDALTVNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAHSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
Pcrglx protein F 906 Penicillium Chrysogenum FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVKSSSSSSESSAPNSSIVVTDNSDALTVNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAHSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
Pcrglx protein G 906 Penicillium Chrysogenum FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVKSSSSSSESSAPNSSIVVTDNSDALTVNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAHSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
Pcrglx protein H 906 Penicillium Chrysogenum FNCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTGDTEDKSELQSWATGYWADGSLKWTAHAIAESNQIYDQYTVTASSLGCVKSSSSSSESSAPNSSIVVTDNSDALTVNTGEVAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPIQYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLYANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDGGIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPTWADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLAVGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQDGYEDQLDALEITYEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLTAYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFYKGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFWLYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAKQARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDGWEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIANLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSEAIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSKISLLQAHSRLAAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEAAWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-06-07
Deposition Author(s): Iwai, M. , Kunishige, Y. , Nishimura, S. , Sakamoto, T. , Tada, T.