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5XLG

Crystal structure of anaerobically purified and aerobically crystallized d. vulgaris miyazaki f [nife]-hydrogenase

PDB DOI: 10.2210/pdb5xlg/pdb

Classification: OXIDOREDUCTASE
Organism(s): Desulfovibrio Vulgaris (Strain Miyazaki F / Dsm 19637)

Deposited: 2017-05-10
Deposition Author(s): Higuchi, Y. , Hiromoto, T. , Mochida, S. , Nishikawa, K. , Shibata, N.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.64 Å

Literature

Crystal structure of anaerobically purified and aerobically crystallized d. vulgaris miyazaki f [nife]-hydrogenase

Higuchi, Y. , Hiromoto, T. , Mochida, S. , Nishikawa, K. , Shibata, N.

Primary Citation of Related Structures: 5XLG


Proteins
Molecule Chains Sequence Length Organism Sequence
Periplasmic [NiFe] hydrogenase small subunit S 267 Desulfovibrio Vulgaris (Strain Miyazaki F / Dsm 19637) LMGPRRPSVVYLHNAECTGCSESVLRAFEPYIDTLILDTLSLDYHETIMAAAGDAAEAALEQAVNSPHGFIAVVEGGIPTAANGIYGKVANHTMLDICSRILPKAQAVIAYGTCATFGGVQAAKPNPTGAKGVNDALKHLGVKAINIAGCPPNPYNLVGTIVYYLKNKAAPELDSLNRPTMFFGQTVHEQCPRLPHFDAGEFAPSFESEEARKGWCLYELGCKGPVTMNNCPKIKFNQTNWPVDAGHPCIGCSEPDFWDAMTPFYQN
Periplasmic [NiFe] hydrogenase large subunit L 552 Desulfovibrio Vulgaris (Strain Miyazaki F / Dsm 19637) MSGCRAQNAPGGIPVTPKSSYSGPIVVDPVTRIEGHLRIEVEVENGKVKNAYSSSTLFRGLEIILKGRDPRDAQHFTQRTCGVCTYTHALASTRCVDNAVGVHIPKNATYIRNLVLGAQYLHDHIVHFYHLHALDFVDVTAALKADPAKAAKVASSISPRKTTAADLKAVQDKLKTFVESGQLGPFTNAYFLGGHPAYYLDPETNLIATAHYLEALRLQVKAARAMAVFGAKNPHTQFTVVGGVTCYDALTPQRIAEFEALWKETKAFVDEVYIPDLLVVAAAYKDWTQYGGTDNFITFGEFPKDEYDLNSRFFKPGVVFKRDFKNIKPFDKMQIEEHVRHSWYEGAEARHPWKGQTQPKYTDLHGDDRYSWMKAPRYMGEPMETGPLAQVLIAYSQGHPKVKAVTDAVLAKLGVGPEALFSTLGRTAARGIETAVIAEYVGVMLQEYKDNIAKGDNVICAPWEMPKQAEGVGFVNAPRGGLSHWIRIEDGKIGNFQLVVPSTWTLGPRCDKNKLSPVEASLIGTPVADAKRPVEILRTVHSFDPCIACGVH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-05-10
Deposition Author(s): Higuchi, Y. , Hiromoto, T. , Mochida, S. , Nishikawa, K. , Shibata, N.