5XFA
Crystal structure of nad+-reducing [nife]-hydrogenase in the h2-reduced state
PDB DOI: 10.2210/pdb5xfa/pdb
Classification: OXIDOREDUCTASE Organism(s): Hydrogenophilus Thermoluteolus
Deposited: 2017-04-09 Deposition Author(s): Higuchi, Y. , Hirota, S. , Igarashi, Y. , Ikeda, Y. , Ishii, M. , Nakagawa, H. , Nakashima, H. , Nishihara, H. , Ogo, S. , Shomura, Y. , Tai, H. , Taketa, M. , Yoon, K.S.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.7 Å
Crystal structure of nad+-reducing [nife]-hydrogenase in the h2-reduced state
Higuchi, Y. , Hirota, S. , Igarashi, Y. , Ikeda, Y. , Ishii, M. , Nakagawa, H. , Nakashima, H. , Nishihara, H. , Ogo, S. , Shomura, Y. , Tai, H. , Taketa, M. , Yoon, K.S.
Primary Citation of Related Structures: 5XFA
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| NAD-reducing hydrogenase | A | 591 | Hydrogenophilus Thermoluteolus | MTTERQRTAPGLLAALHQARSRFGRPLDAQALAELSTAFSLPPGEIAATASFYHFFQTPPARYQIHFVDHVVDHHAGVAALCNHLCAAFAIQPGQRTADARLFVGWTACAGLSDQAPAALINGRPMPRLDAARIDALIEKIQAQIPMDQWPTEWFAVTNAIHRHGPLLTWLDTTPAEAVFEHPTAHDPDAILQAVTDAGLRGRGGAGFPTATKWRFCRENADPERFLICNADEGEPGTFKDRVLLTRYPEHLFAGMILAARAIGADKAILYLRYEYQYLLPQLEAARERIASAQATVPQAERVTLEIALGAGAYVCGEESALIESLEGKPGRPRVRPPYPVTQGYLGHPTVVNNVETLVAVAAIVGNGAAWWRALGTPDSSGPKLFCVSGDVAQPGLYEFPYGVALGDVVTAARPLGTRYAVQVSGPSGTLLPATPEQLARPLAFEALPCNGTVMVFDVRRDPVAIVHHFARFFAHESCGFCTPCRVGTQLIAKTFEKIAAGYATRFDLERLAPALEAMRLASNCGFGLSAGNPVRDLIAHFRQQLEAQLQPHDFIPAFSLDAELAATRRLTGRDDPHAHLAQFEQPEVTR |
| NAD-reducing hydrogenase | E | 591 | Hydrogenophilus Thermoluteolus | MTTERQRTAPGLLAALHQARSRFGRPLDAQALAELSTAFSLPPGEIAATASFYHFFQTPPARYQIHFVDHVVDHHAGVAALCNHLCAAFAIQPGQRTADARLFVGWTACAGLSDQAPAALINGRPMPRLDAARIDALIEKIQAQIPMDQWPTEWFAVTNAIHRHGPLLTWLDTTPAEAVFEHPTAHDPDAILQAVTDAGLRGRGGAGFPTATKWRFCRENADPERFLICNADEGEPGTFKDRVLLTRYPEHLFAGMILAARAIGADKAILYLRYEYQYLLPQLEAARERIASAQATVPQAERVTLEIALGAGAYVCGEESALIESLEGKPGRPRVRPPYPVTQGYLGHPTVVNNVETLVAVAAIVGNGAAWWRALGTPDSSGPKLFCVSGDVAQPGLYEFPYGVALGDVVTAARPLGTRYAVQVSGPSGTLLPATPEQLARPLAFEALPCNGTVMVFDVRRDPVAIVHHFARFFAHESCGFCTPCRVGTQLIAKTFEKIAAGYATRFDLERLAPALEAMRLASNCGFGLSAGNPVRDLIAHFRQQLEAQLQPHDFIPAFSLDAELAATRRLTGRDDPHAHLAQFEQPEVTR |
| NAD-reducing hydrogenase | B | 242 | Hydrogenophilus Thermoluteolus | MRPTTPPFASETFTLDEESIPFVPGQTVLEAALAAGRYIPHLCWHPEMGNHGSCRLCVVEANGRIQASCALPAQPGLQVVSKSETLTRVRRTLLEMLFAEGNHFCPGCEKSGDCLLQALAYAHGMTASHFDPFYPQRRIDASHPDLWLDPNRCILCGLCVRASLAEGKEALVIGGRGIASRLLATSASGRLGDTALAATDRAARICPVGALNFKAAGFTTPIGKRRFDHRPPEAMSDKERYT |
| NAD-reducing hydrogenase | F | 242 | Hydrogenophilus Thermoluteolus | MRPTTPPFASETFTLDEESIPFVPGQTVLEAALAAGRYIPHLCWHPEMGNHGSCRLCVVEANGRIQASCALPAQPGLQVVSKSETLTRVRRTLLEMLFAEGNHFCPGCEKSGDCLLQALAYAHGMTASHFDPFYPQRRIDASHPDLWLDPNRCILCGLCVRASLAEGKEALVIGGRGIASRLLATSASGRLGDTALAATDRAARICPVGALNFKAAGFTTPIGKRRFDHRPPEAMSDKERYT |
| NAD-reducing hydrogenase | C | 189 | Hydrogenophilus Thermoluteolus | MTSAAPSAMPPRKIRIATASLAGCFGCHMSFADIDTRLLALAEWVTFDRSPLTDWKTVGECDIALIEGGVCNAENVEVLRAYRRAARILVAVGACAINGGLPAQRNQHRVERLLTQVFEADRHLAPGSRVPNDPELPLLLEHVHPIHEIVRVDYYLPGCPPTAEVIWTFLTDLLVGREPHFPYPTLRYD |
| NAD-reducing hydrogenase | G | 189 | Hydrogenophilus Thermoluteolus | MTSAAPSAMPPRKIRIATASLAGCFGCHMSFADIDTRLLALAEWVTFDRSPLTDWKTVGECDIALIEGGVCNAENVEVLRAYRRAARILVAVGACAINGGLPAQRNQHRVERLLTQVFEADRHLAPGSRVPNDPELPLLLEHVHPIHEIVRVDYYLPGCPPTAEVIWTFLTDLLVGREPHFPYPTLRYD |
| NAD-reducing hydrogenase | D | 468 | Hydrogenophilus Thermoluteolus | MTQHAPQAVSPRPSLPANATRRVAIDPLSRVEGHGKVTIWLDDDGQVVEARLHIVEFRGFEAFIVGRPYWEAPVVVQRLCGICPVSHHLAAAKALDRLVGVTQLPPTAEKMRRLMHYGQVLQSHALHFFYLAAPDLLLGFSADPAQRNVFGLAAQKRELARQGILVRQFGQECIEATAGKRIHGTSAVPGGIHKNLSRRERMALLSRAPEIRSWCEAAVALIERLFTEHAPFFAQFGSFQTKTFSLVAADGSLDLYDGTFRVKEANGAILIDHYDPNDYDQLLVEAVRPWSYMKFPYLKAYGEPDGFYRVGPSARLINCDRLTTARAEAARQRFLTFDQGTVAHSTLGYHWARLIEMLHCAELIEALLTDADLEGGELRARGQRQHRGVGVIEAPRGTLIHHYEVGDDDLITYCNLIVSTTHNNAVMNQAVTTAAKAFLSGVTLTEALLNHIEVAVRAFDPCLSCATH |
| NAD-reducing hydrogenase | H | 468 | Hydrogenophilus Thermoluteolus | MTQHAPQAVSPRPSLPANATRRVAIDPLSRVEGHGKVTIWLDDDGQVVEARLHIVEFRGFEAFIVGRPYWEAPVVVQRLCGICPVSHHLAAAKALDRLVGVTQLPPTAEKMRRLMHYGQVLQSHALHFFYLAAPDLLLGFSADPAQRNVFGLAAQKRELARQGILVRQFGQECIEATAGKRIHGTSAVPGGIHKNLSRRERMALLSRAPEIRSWCEAAVALIERLFTEHAPFFAQFGSFQTKTFSLVAADGSLDLYDGTFRVKEANGAILIDHYDPNDYDQLLVEAVRPWSYMKFPYLKAYGEPDGFYRVGPSARLINCDRLTTARAEAARQRFLTFDQGTVAHSTLGYHWARLIEMLHCAELIEALLTDADLEGGELRARGQRQHRGVGVIEAPRGTLIHHYEVGDDDLITYCNLIVSTTHNNAVMNQAVTTAAKAFLSGVTLTEALLNHIEVAVRAFDPCLSCATH |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-04-09 Deposition Author(s): Higuchi, Y. , Hirota, S. , Igarashi, Y. , Ikeda, Y. , Ishii, M. , Nakagawa, H. , Nakashima, H. , Nishihara, H. , Ogo, S. , Shomura, Y. , Tai, H. , Taketa, M. , Yoon, K.S.