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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5XB7

Gh42 alpha-l-arabinopyranosidase from bifidobacterium animalis subsp. lactis bl-04

PDB DOI: 10.2210/pdb5xb7/pdb

Classification: HYDROLASE
Organism(s): Bifidobacterium Animalis Subsp. Lactis

Deposited: 2017-03-16
Deposition Author(s): Abou Hachem, M. , Arakawa, T. , Fushinobu, S. , Katayama, T. , Kitaoka, M. , Lo Leggio, L. , Svensson, B. , Viborg, A.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

5xb7
Literature

Gh42 alpha-l-arabinopyranosidase from bifidobacterium animalis subsp. lactis bl-04

Abou Hachem, M. , Arakawa, T. , Fushinobu, S. , Katayama, T. , Kitaoka, M. , Lo Leggio, L. , Svensson, B. , Viborg, A.H.

Primary Citation of Related Structures: 5XB7


Proteins
Molecule Chains Sequence Length Organism Sequence
Beta-galactosidase A 712 Bifidobacterium Animalis Subsp. Lactis MARAYTDPILFGAAYYDEYIPRDLDRIDTDMEMMTRAGINVIRIGESTWSTCEPQPGHFDWTHIDRALDAATNAGINVIVGTPTYAVPTWLVAMYPDVLATTPAGEPHYGARQIMNIVNPAYRLYGERVIRSLISHVAQQPCVIGYQVDNETKYYDSVSHDMQVMFIKQLRHEFKNDLEALNEAYGLDYWSNRINAWEDFPDLTGSINESLRARFDRFRRDQVAEYLAWQASIIREYMRDDQFITHNFDYEWRGHSYGLQPAVDHFRAARALDICGVDIYHPSEDALTGKEIAFGGDMARSAGGGNYLVLETQAQGQHGWLPYPGQLRLQAYSHLASGADGIMYWHWHSIHNSFETYWRGLLSHDFESNPTYEEAGRFGREIGDPRIGDTLSHLSKRNAVAILASNESLTALSWFHIETGFPMGGTLTYNDVLRSIYDALFELNVEVDFLPADASADQLAGYSLVIAPALYTTDQQTIDRLARYVKNGGHLLATMRSFVADENVKVWHDKAPHHLVDIFGMTYNQFTRPMGVSLKCPDTLADLAGASANDFIEMLSPAPETHVLAWYDHYAWDSYAAITRHAFGSGDAQWVGTQLQADAWRTVLAEALSNAGVHTPGMELAGTVCVRSGTNTAGDTVTYLLNYSGSPITFRAPASGTFLLGHPTDDGEQAVTAETPVTVGDAVTLPRWGVDIIVGRQPTMNAAALEHHHHHH
Beta-galactosidase B 712 Bifidobacterium Animalis Subsp. Lactis MARAYTDPILFGAAYYDEYIPRDLDRIDTDMEMMTRAGINVIRIGESTWSTCEPQPGHFDWTHIDRALDAATNAGINVIVGTPTYAVPTWLVAMYPDVLATTPAGEPHYGARQIMNIVNPAYRLYGERVIRSLISHVAQQPCVIGYQVDNETKYYDSVSHDMQVMFIKQLRHEFKNDLEALNEAYGLDYWSNRINAWEDFPDLTGSINESLRARFDRFRRDQVAEYLAWQASIIREYMRDDQFITHNFDYEWRGHSYGLQPAVDHFRAARALDICGVDIYHPSEDALTGKEIAFGGDMARSAGGGNYLVLETQAQGQHGWLPYPGQLRLQAYSHLASGADGIMYWHWHSIHNSFETYWRGLLSHDFESNPTYEEAGRFGREIGDPRIGDTLSHLSKRNAVAILASNESLTALSWFHIETGFPMGGTLTYNDVLRSIYDALFELNVEVDFLPADASADQLAGYSLVIAPALYTTDQQTIDRLARYVKNGGHLLATMRSFVADENVKVWHDKAPHHLVDIFGMTYNQFTRPMGVSLKCPDTLADLAGASANDFIEMLSPAPETHVLAWYDHYAWDSYAAITRHAFGSGDAQWVGTQLQADAWRTVLAEALSNAGVHTPGMELAGTVCVRSGTNTAGDTVTYLLNYSGSPITFRAPASGTFLLGHPTDDGEQAVTAETPVTVGDAVTLPRWGVDIIVGRQPTMNAAALEHHHHHH
Beta-galactosidase C 712 Bifidobacterium Animalis Subsp. Lactis MARAYTDPILFGAAYYDEYIPRDLDRIDTDMEMMTRAGINVIRIGESTWSTCEPQPGHFDWTHIDRALDAATNAGINVIVGTPTYAVPTWLVAMYPDVLATTPAGEPHYGARQIMNIVNPAYRLYGERVIRSLISHVAQQPCVIGYQVDNETKYYDSVSHDMQVMFIKQLRHEFKNDLEALNEAYGLDYWSNRINAWEDFPDLTGSINESLRARFDRFRRDQVAEYLAWQASIIREYMRDDQFITHNFDYEWRGHSYGLQPAVDHFRAARALDICGVDIYHPSEDALTGKEIAFGGDMARSAGGGNYLVLETQAQGQHGWLPYPGQLRLQAYSHLASGADGIMYWHWHSIHNSFETYWRGLLSHDFESNPTYEEAGRFGREIGDPRIGDTLSHLSKRNAVAILASNESLTALSWFHIETGFPMGGTLTYNDVLRSIYDALFELNVEVDFLPADASADQLAGYSLVIAPALYTTDQQTIDRLARYVKNGGHLLATMRSFVADENVKVWHDKAPHHLVDIFGMTYNQFTRPMGVSLKCPDTLADLAGASANDFIEMLSPAPETHVLAWYDHYAWDSYAAITRHAFGSGDAQWVGTQLQADAWRTVLAEALSNAGVHTPGMELAGTVCVRSGTNTAGDTVTYLLNYSGSPITFRAPASGTFLLGHPTDDGEQAVTAETPVTVGDAVTLPRWGVDIIVGRQPTMNAAALEHHHHHH
Beta-galactosidase D 712 Bifidobacterium Animalis Subsp. Lactis MARAYTDPILFGAAYYDEYIPRDLDRIDTDMEMMTRAGINVIRIGESTWSTCEPQPGHFDWTHIDRALDAATNAGINVIVGTPTYAVPTWLVAMYPDVLATTPAGEPHYGARQIMNIVNPAYRLYGERVIRSLISHVAQQPCVIGYQVDNETKYYDSVSHDMQVMFIKQLRHEFKNDLEALNEAYGLDYWSNRINAWEDFPDLTGSINESLRARFDRFRRDQVAEYLAWQASIIREYMRDDQFITHNFDYEWRGHSYGLQPAVDHFRAARALDICGVDIYHPSEDALTGKEIAFGGDMARSAGGGNYLVLETQAQGQHGWLPYPGQLRLQAYSHLASGADGIMYWHWHSIHNSFETYWRGLLSHDFESNPTYEEAGRFGREIGDPRIGDTLSHLSKRNAVAILASNESLTALSWFHIETGFPMGGTLTYNDVLRSIYDALFELNVEVDFLPADASADQLAGYSLVIAPALYTTDQQTIDRLARYVKNGGHLLATMRSFVADENVKVWHDKAPHHLVDIFGMTYNQFTRPMGVSLKCPDTLADLAGASANDFIEMLSPAPETHVLAWYDHYAWDSYAAITRHAFGSGDAQWVGTQLQADAWRTVLAEALSNAGVHTPGMELAGTVCVRSGTNTAGDTVTYLLNYSGSPITFRAPASGTFLLGHPTDDGEQAVTAETPVTVGDAVTLPRWGVDIIVGRQPTMNAAALEHHHHHH
Beta-galactosidase E 712 Bifidobacterium Animalis Subsp. Lactis MARAYTDPILFGAAYYDEYIPRDLDRIDTDMEMMTRAGINVIRIGESTWSTCEPQPGHFDWTHIDRALDAATNAGINVIVGTPTYAVPTWLVAMYPDVLATTPAGEPHYGARQIMNIVNPAYRLYGERVIRSLISHVAQQPCVIGYQVDNETKYYDSVSHDMQVMFIKQLRHEFKNDLEALNEAYGLDYWSNRINAWEDFPDLTGSINESLRARFDRFRRDQVAEYLAWQASIIREYMRDDQFITHNFDYEWRGHSYGLQPAVDHFRAARALDICGVDIYHPSEDALTGKEIAFGGDMARSAGGGNYLVLETQAQGQHGWLPYPGQLRLQAYSHLASGADGIMYWHWHSIHNSFETYWRGLLSHDFESNPTYEEAGRFGREIGDPRIGDTLSHLSKRNAVAILASNESLTALSWFHIETGFPMGGTLTYNDVLRSIYDALFELNVEVDFLPADASADQLAGYSLVIAPALYTTDQQTIDRLARYVKNGGHLLATMRSFVADENVKVWHDKAPHHLVDIFGMTYNQFTRPMGVSLKCPDTLADLAGASANDFIEMLSPAPETHVLAWYDHYAWDSYAAITRHAFGSGDAQWVGTQLQADAWRTVLAEALSNAGVHTPGMELAGTVCVRSGTNTAGDTVTYLLNYSGSPITFRAPASGTFLLGHPTDDGEQAVTAETPVTVGDAVTLPRWGVDIIVGRQPTMNAAALEHHHHHH
Beta-galactosidase F 712 Bifidobacterium Animalis Subsp. Lactis MARAYTDPILFGAAYYDEYIPRDLDRIDTDMEMMTRAGINVIRIGESTWSTCEPQPGHFDWTHIDRALDAATNAGINVIVGTPTYAVPTWLVAMYPDVLATTPAGEPHYGARQIMNIVNPAYRLYGERVIRSLISHVAQQPCVIGYQVDNETKYYDSVSHDMQVMFIKQLRHEFKNDLEALNEAYGLDYWSNRINAWEDFPDLTGSINESLRARFDRFRRDQVAEYLAWQASIIREYMRDDQFITHNFDYEWRGHSYGLQPAVDHFRAARALDICGVDIYHPSEDALTGKEIAFGGDMARSAGGGNYLVLETQAQGQHGWLPYPGQLRLQAYSHLASGADGIMYWHWHSIHNSFETYWRGLLSHDFESNPTYEEAGRFGREIGDPRIGDTLSHLSKRNAVAILASNESLTALSWFHIETGFPMGGTLTYNDVLRSIYDALFELNVEVDFLPADASADQLAGYSLVIAPALYTTDQQTIDRLARYVKNGGHLLATMRSFVADENVKVWHDKAPHHLVDIFGMTYNQFTRPMGVSLKCPDTLADLAGASANDFIEMLSPAPETHVLAWYDHYAWDSYAAITRHAFGSGDAQWVGTQLQADAWRTVLAEALSNAGVHTPGMELAGTVCVRSGTNTAGDTVTYLLNYSGSPITFRAPASGTFLLGHPTDDGEQAVTAETPVTVGDAVTLPRWGVDIIVGRQPTMNAAALEHHHHHH
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-03-16
Deposition Author(s): Abou Hachem, M. , Arakawa, T. , Fushinobu, S. , Katayama, T. , Kitaoka, M. , Lo Leggio, L. , Svensson, B. , Viborg, A.H.