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FASTA Sequence PDB Format mmCIF Format
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5X11

Crystal structure of bacillus subtilis padr in complex with operator dna

PDB DOI: 10.2210/pdb5x11/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct

Deposited: 2017-01-24
Deposition Author(s): Hong, M. , Kwak, Y.M. , Park, S.C. , Song, W.S. , Yoon, S.I.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.65 Å

Literature

Crystal structure of bacillus subtilis padr in complex with operator dna

Hong, M. , Kwak, Y.M. , Park, S.C. , Song, W.S. , Yoon, S.I.

Primary Citation of Related Structures: 5X11


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (28-MER) i 28 NA CGGAACATGTAAATAGTTACATGATTAC
DNA (28-MER) m 28 NA CGGAACATGTAAATAGTTACATGATTAC
DNA (28-MER) j 28 NA GTAATCATGTAACTATTTACATGTTCCG
DNA (28-MER) n 28 NA GTAATCATGTAACTATTTACATGTTCCG

Proteins
Molecule Chains Sequence Length Organism Sequence
Transcriptional regulator A 188 Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct GSAKDPMRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISSLSRQEASDLFTDQLLKRKAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMIDED
Transcriptional regulator B 188 Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct GSAKDPMRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISSLSRQEASDLFTDQLLKRKAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMIDED
Transcriptional regulator C 188 Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct GSAKDPMRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISSLSRQEASDLFTDQLLKRKAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMIDED
Transcriptional regulator D 188 Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct GSAKDPMRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISSLSRQEASDLFTDQLLKRKAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMIDED
Transcriptional regulator E 188 Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct GSAKDPMRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISSLSRQEASDLFTDQLLKRKAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMIDED
Transcriptional regulator F 188 Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct GSAKDPMRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISSLSRQEASDLFTDQLLKRKAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMIDED
Transcriptional regulator G 188 Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct GSAKDPMRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISSLSRQEASDLFTDQLLKRKAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMIDED
Transcriptional regulator H 188 Bacillus Subtilis Subsp. Spizizenii Strain W23 , Synthetic Construct GSAKDPMRVLKYAILGLLRKGELSGYDITSYFKEELGQFWSAKHSQIYPELKKLTDEGFITFRTTIQGTKLEKKMYTLTDSGKQELHDWLIRHQPIPETVKDEFMLKAYFISSLSRQEASDLFTDQLLKRKAKLSDLQGSYEKLMASAEPMSFSSPDFGHYLVLTKALEREKNYVSWLESILAMIDED
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-01-24
Deposition Author(s): Hong, M. , Kwak, Y.M. , Park, S.C. , Song, W.S. , Yoon, S.I.