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5X07

Crystal structure of foxa2 dna binding domain bound to a full consensus dna site

PDB DOI: 10.2210/pdb5x07/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2017-01-20
Deposition Author(s): Chen, L. , Chen, X. , Chen, Y. , Chen, Z. , Guo, M. , Jiang, L. , Li, J. , Qu, L. , Wu, D. , Zhou, Z.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.796 Å

5x07
Literature

Crystal structure of foxa2 dna binding domain bound to a full consensus dna site

Chen, L. , Chen, X. , Chen, Y. , Chen, Z. , Guo, M. , Jiang, L. , Li, J. , Qu, L. , Wu, D. , Zhou, Z.

Primary Citation of Related Structures: 5X07


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*CP*TP*TP*GP*TP*TP*TP*AP*CP*AP*TP*TP*TP*TP*G)-3') d 16 NA TCTTGTTTACATTTTG
DNA (5'-D(*TP*CP*TP*TP*GP*TP*TP*TP*AP*CP*AP*TP*TP*TP*TP*G)-3') a 16 NA TCTTGTTTACATTTTG
DNA (5'-D(*TP*CP*TP*TP*GP*TP*TP*TP*AP*CP*AP*TP*TP*TP*TP*G)-3') g 16 NA TCTTGTTTACATTTTG
DNA (5'-D(*TP*CP*TP*TP*GP*TP*TP*TP*AP*CP*AP*TP*TP*TP*TP*G)-3') j 16 NA TCTTGTTTACATTTTG
DNA (5'-D(*CP*AP*AP*AP*AP*TP*GP*TP*AP*AP*AP*CP*AP*AP*GP*A)-3') e 16 NA CAAAATGTAAACAAGA
DNA (5'-D(*CP*AP*AP*AP*AP*TP*GP*TP*AP*AP*AP*CP*AP*AP*GP*A)-3') b 16 NA CAAAATGTAAACAAGA
DNA (5'-D(*CP*AP*AP*AP*AP*TP*GP*TP*AP*AP*AP*CP*AP*AP*GP*A)-3') h 16 NA CAAAATGTAAACAAGA
DNA (5'-D(*CP*AP*AP*AP*AP*TP*GP*TP*AP*AP*AP*CP*AP*AP*GP*A)-3') k 16 NA CAAAATGTAAACAAGA

Proteins
Molecule Chains Sequence Length Organism Sequence
Hepatocyte nuclear factor 3-beta F 104 Homo Sapiens , Synthetic Construct GPHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCE
Hepatocyte nuclear factor 3-beta C 104 Homo Sapiens , Synthetic Construct GPHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCE
Hepatocyte nuclear factor 3-beta I 104 Homo Sapiens , Synthetic Construct GPHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCE
Hepatocyte nuclear factor 3-beta L 104 Homo Sapiens , Synthetic Construct GPHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-01-20
Deposition Author(s): Chen, L. , Chen, X. , Chen, Y. , Chen, Z. , Guo, M. , Jiang, L. , Li, J. , Qu, L. , Wu, D. , Zhou, Z.