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5WNY

Dna polymerase beta substrate complex with incoming 5-fdutp

PDB DOI: 10.2210/pdb5wny/pdb

Classification: DNA LIGASE/DNA, TRANSFERASE
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-08-01
Deposition Author(s): Cloud, A.S. , Freudenthal, B.D. , Holloran, S.M. , Schaich, M.A. , Smith, M.R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

5wny
Literature

Dna polymerase beta substrate complex with incoming 5-fdutp

Cloud, A.S. , Freudenthal, B.D. , Holloran, S.M. , Schaich, M.A. , Smith, M.R.

Primary Citation of Related Structures: 5WNY


Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') t 16 NA CCGACAGCGCATCAGC
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') p 10 NA GCTGATGCGC
DNA (5'-D(P*GP*TP*CP*GP*G)-3') d 5 NA GTCGG

Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase beta A 335 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-08-01
Deposition Author(s): Cloud, A.S. , Freudenthal, B.D. , Holloran, S.M. , Schaich, M.A. , Smith, M.R.