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FASTA Sequence PDB Format mmCIF Format
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5WLG

Crystal structure of h-2db with the gap501 peptide (sql)

PDB DOI: 10.2210/pdb5wlg/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Mus Musculus , Plasmodium Berghei

Deposited: 2017-07-26
Deposition Author(s): Farenc, C. , Gras, S. , Josephs, T. , Rossjohn, J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.1 Å

5wlg
Literature

Crystal structure of h-2db with the gap501 peptide (sql)

Farenc, C. , Gras, S. , Josephs, T. , Rossjohn, J.

Primary Citation of Related Structures: 5WLG


Proteins
Molecule Chains Sequence Length Organism Sequence
H-2 class I histocompatibility antigen, D-B alpha chain A 278 Homo Sapiens , Mus Musculus , Plasmodium Berghei GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEPPP
H-2 class I histocompatibility antigen, D-B alpha chain F 278 Homo Sapiens , Mus Musculus , Plasmodium Berghei GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEPPP
Beta-2-microglobulin B 99 Homo Sapiens , Mus Musculus , Plasmodium Berghei IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
Beta-2-microglobulin G 99 Homo Sapiens , Mus Musculus , Plasmodium Berghei IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYACRVKHASMAEPKTVYWDRDM
GAP50 peptide C 9 Homo Sapiens , Mus Musculus , Plasmodium Berghei SQLLNAKYL
GAP50 peptide H 9 Homo Sapiens , Mus Musculus , Plasmodium Berghei SQLLNAKYL
T cell receptor alpha variable 8D-2,Human nkt tcr alpha chain D 182 Homo Sapiens , Mus Musculus , Plasmodium Berghei ENLQALSIQEGEDVTMNCSYKTYTTVVHWYRQDSGRGPALIILIRSNEREKRSGRLRATLDTSSQSSSLSITAAQCEDTAVYFCATVYAQGLTFGLGTRVSVFPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFN
T cell receptor alpha variable 8D-2,Human nkt tcr alpha chain I 182 Homo Sapiens , Mus Musculus , Plasmodium Berghei ENLQALSIQEGEDVTMNCSYKTYTTVVHWYRQDSGRGPALIILIRSNEREKRSGRLRATLDTSSQSSSLSITAAQCEDTAVYFCATVYAQGLTFGLGTRVSVFPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFN
T-cell receptor beta chain V region C5,Human nkt tcr beta chain E 243 Homo Sapiens , Mus Musculus , Plasmodium Berghei EAAVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDIPDGYKASRPSQENFSLILELASLSQTAVYFCASSDWGDTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
T-cell receptor beta chain V region C5,Human nkt tcr beta chain J 243 Homo Sapiens , Mus Musculus , Plasmodium Berghei EAAVTQSPRSKVAVTGGKVTLSCHQTNNHDYMYWYRQDTGHGLRLIHYSYVADSTEKGDIPDGYKASRPSQENFSLILELASLSQTAVYFCASSDWGDTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-07-26
Deposition Author(s): Farenc, C. , Gras, S. , Josephs, T. , Rossjohn, J.