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5WK1

Structure of the major capsid protein and the capsid stabilizing protein of the marine siphovirus tw1

PDB DOI: 10.2210/pdb5wk1/pdb

Classification: VIRUS
Organism(s): Pseudoalteromonas Phage Tw1

Deposited: 2017-07-24
Deposition Author(s): Rossmann, M.G. , Wang, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

5wk1
Literature

Structure of the major capsid protein and the capsid stabilizing protein of the marine siphovirus tw1

Rossmann, M.G. , Wang, Z.

Primary Citation of Related Structures: 5WK1


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid Stabilizing Protein X 148 Pseudoalteromonas Phage Tw1 MANSKNSIFVGGAGRVKQTIEGLAQSAFKPGQLLARAAGDAIDVTAKASTTYGNEFLICDDQPQTLGGGTDVAVTAGDTVQAISVLPGQYVLLSFAATQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTTAGTLVLCRAI
Capsid Stabilizing Protein L 148 Pseudoalteromonas Phage Tw1 MANSKNSIFVGGAGRVKQTIEGLAQSAFKPGQLLARAAGDAIDVTAKASTTYGNEFLICDDQPQTLGGGTDVAVTAGDTVQAISVLPGQYVLLSFAATQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTTAGTLVLCRAI
Capsid Stabilizing Protein Y 148 Pseudoalteromonas Phage Tw1 MANSKNSIFVGGAGRVKQTIEGLAQSAFKPGQLLARAAGDAIDVTAKASTTYGNEFLICDDQPQTLGGGTDVAVTAGDTVQAISVLPGQYVLLSFAATQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTTAGTLVLCRAI
Capsid Stabilizing Protein M 148 Pseudoalteromonas Phage Tw1 MANSKNSIFVGGAGRVKQTIEGLAQSAFKPGQLLARAAGDAIDVTAKASTTYGNEFLICDDQPQTLGGGTDVAVTAGDTVQAISVLPGQYVLLSFAATQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTTAGTLVLCRAI
Capsid Stabilizing Protein S 148 Pseudoalteromonas Phage Tw1 MANSKNSIFVGGAGRVKQTIEGLAQSAFKPGQLLARAAGDAIDVTAKASTTYGNEFLICDDQPQTLGGGTDVAVTAGDTVQAISVLPGQYVLLSFAATQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTTAGTLVLCRAI
Capsid Stabilizing Protein Z 148 Pseudoalteromonas Phage Tw1 MANSKNSIFVGGAGRVKQTIEGLAQSAFKPGQLLARAAGDAIDVTAKASTTYGNEFLICDDQPQTLGGGTDVAVTAGDTVQAISVLPGQYVLLSFAATQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTTAGTLVLCRAI
Capsid Stabilizing Protein K 148 Pseudoalteromonas Phage Tw1 MANSKNSIFVGGAGRVKQTIEGLAQSAFKPGQLLARAAGDAIDVTAKASTTYGNEFLICDDQPQTLGGGTDVAVTAGDTVQAISVLPGQYVLLSFAATQNVTTKGAAVASNGDGNFKLGNPATEQTFAVTEEIINVTTAGTLVLCRAI
Major Capsid Protein A 352 Pseudoalteromonas Phage Tw1 MSIHFDFKNKQGKELLALNRQWNELSGYRAHAFNESVNMLNNVGETFGVNGANAMQTNMQRVDEMYRLVDSTGTGEDRDWGNQTLLGRLLSQAQTVSIGKKVIESRRYSEAGRINRSMSGQTDIDMDKTKSSYQKMVIPVFDGAYGRDFRDYEAMRSEMLPALAEDSEEIEFTLLDDVNDYLWNGDAKLKVDTAVWGGLKADASVAAYSLGADLTTATEAQVVAELLALLDVLRITNKKSGPFELYISPQIMSNWQKLAGANTNGFMNIMAAVRALIPEFSVVEADSALQGNQVLCSVVGTRGLHAKIGMMMSSYQVPRVMHNDPYQFVKWFAAGFQSNNSFSGLKSTVYGS
Major Capsid Protein B 352 Pseudoalteromonas Phage Tw1 MSIHFDFKNKQGKELLALNRQWNELSGYRAHAFNESVNMLNNVGETFGVNGANAMQTNMQRVDEMYRLVDSTGTGEDRDWGNQTLLGRLLSQAQTVSIGKKVIESRRYSEAGRINRSMSGQTDIDMDKTKSSYQKMVIPVFDGAYGRDFRDYEAMRSEMLPALAEDSEEIEFTLLDDVNDYLWNGDAKLKVDTAVWGGLKADASVAAYSLGADLTTATEAQVVAELLALLDVLRITNKKSGPFELYISPQIMSNWQKLAGANTNGFMNIMAAVRALIPEFSVVEADSALQGNQVLCSVVGTRGLHAKIGMMMSSYQVPRVMHNDPYQFVKWFAAGFQSNNSFSGLKSTVYGS
Major Capsid Protein C 352 Pseudoalteromonas Phage Tw1 MSIHFDFKNKQGKELLALNRQWNELSGYRAHAFNESVNMLNNVGETFGVNGANAMQTNMQRVDEMYRLVDSTGTGEDRDWGNQTLLGRLLSQAQTVSIGKKVIESRRYSEAGRINRSMSGQTDIDMDKTKSSYQKMVIPVFDGAYGRDFRDYEAMRSEMLPALAEDSEEIEFTLLDDVNDYLWNGDAKLKVDTAVWGGLKADASVAAYSLGADLTTATEAQVVAELLALLDVLRITNKKSGPFELYISPQIMSNWQKLAGANTNGFMNIMAAVRALIPEFSVVEADSALQGNQVLCSVVGTRGLHAKIGMMMSSYQVPRVMHNDPYQFVKWFAAGFQSNNSFSGLKSTVYGS
Major Capsid Protein D 352 Pseudoalteromonas Phage Tw1 MSIHFDFKNKQGKELLALNRQWNELSGYRAHAFNESVNMLNNVGETFGVNGANAMQTNMQRVDEMYRLVDSTGTGEDRDWGNQTLLGRLLSQAQTVSIGKKVIESRRYSEAGRINRSMSGQTDIDMDKTKSSYQKMVIPVFDGAYGRDFRDYEAMRSEMLPALAEDSEEIEFTLLDDVNDYLWNGDAKLKVDTAVWGGLKADASVAAYSLGADLTTATEAQVVAELLALLDVLRITNKKSGPFELYISPQIMSNWQKLAGANTNGFMNIMAAVRALIPEFSVVEADSALQGNQVLCSVVGTRGLHAKIGMMMSSYQVPRVMHNDPYQFVKWFAAGFQSNNSFSGLKSTVYGS
Major Capsid Protein E 352 Pseudoalteromonas Phage Tw1 MSIHFDFKNKQGKELLALNRQWNELSGYRAHAFNESVNMLNNVGETFGVNGANAMQTNMQRVDEMYRLVDSTGTGEDRDWGNQTLLGRLLSQAQTVSIGKKVIESRRYSEAGRINRSMSGQTDIDMDKTKSSYQKMVIPVFDGAYGRDFRDYEAMRSEMLPALAEDSEEIEFTLLDDVNDYLWNGDAKLKVDTAVWGGLKADASVAAYSLGADLTTATEAQVVAELLALLDVLRITNKKSGPFELYISPQIMSNWQKLAGANTNGFMNIMAAVRALIPEFSVVEADSALQGNQVLCSVVGTRGLHAKIGMMMSSYQVPRVMHNDPYQFVKWFAAGFQSNNSFSGLKSTVYGS
Major Capsid Protein F 352 Pseudoalteromonas Phage Tw1 MSIHFDFKNKQGKELLALNRQWNELSGYRAHAFNESVNMLNNVGETFGVNGANAMQTNMQRVDEMYRLVDSTGTGEDRDWGNQTLLGRLLSQAQTVSIGKKVIESRRYSEAGRINRSMSGQTDIDMDKTKSSYQKMVIPVFDGAYGRDFRDYEAMRSEMLPALAEDSEEIEFTLLDDVNDYLWNGDAKLKVDTAVWGGLKADASVAAYSLGADLTTATEAQVVAELLALLDVLRITNKKSGPFELYISPQIMSNWQKLAGANTNGFMNIMAAVRALIPEFSVVEADSALQGNQVLCSVVGTRGLHAKIGMMMSSYQVPRVMHNDPYQFVKWFAAGFQSNNSFSGLKSTVYGS
Major Capsid Protein G 352 Pseudoalteromonas Phage Tw1 MSIHFDFKNKQGKELLALNRQWNELSGYRAHAFNESVNMLNNVGETFGVNGANAMQTNMQRVDEMYRLVDSTGTGEDRDWGNQTLLGRLLSQAQTVSIGKKVIESRRYSEAGRINRSMSGQTDIDMDKTKSSYQKMVIPVFDGAYGRDFRDYEAMRSEMLPALAEDSEEIEFTLLDDVNDYLWNGDAKLKVDTAVWGGLKADASVAAYSLGADLTTATEAQVVAELLALLDVLRITNKKSGPFELYISPQIMSNWQKLAGANTNGFMNIMAAVRALIPEFSVVEADSALQGNQVLCSVVGTRGLHAKIGMMMSSYQVPRVMHNDPYQFVKWFAAGFQSNNSFSGLKSTVYGS
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2017-07-24
Deposition Author(s): Rossmann, M.G. , Wang, Z.