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FASTA Sequence PDB Format mmCIF Format
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5WFE

Cas1-cas2-ihf-dna holo-complex

PDB DOI: 10.2210/pdb5wfe/pdb

Classification: DNA BINDING PROTEIN/DNA
Organism(s): Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct

Deposited: 2017-07-11
Deposition Author(s): Doudna, J.A. , Liu, J.J. , Nogales, E. , Wright, A.V.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.64 Å

Literature

Cas1-cas2-ihf-dna holo-complex

Doudna, J.A. , Liu, J.J. , Nogales, E. , Wright, A.V.

Primary Citation of Related Structures: 5WFE


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas1 A 305 Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
CRISPR-associated endonuclease Cas1 B 305 Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
CRISPR-associated endonuclease Cas1 C 305 Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
CRISPR-associated endonuclease Cas1 D 305 Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
CRISPR-associated endoribonuclease Cas2 E 103 Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPVGSSENLYFQ
CRISPR-associated endoribonuclease Cas2 F 103 Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPVGSSENLYFQ
Integration host factor subunit alpha K 99 Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE
Integration host factor subunit beta L 94 Escherichia Coli K-12 , Escherichia Coli S88 , Synthetic Construct MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (28-MER) g 28 NA AAACACCAGAACGAGTAGTAAATTGGGC
DNA (45-MER) h 61 NA ATTTACTACTCGTTCTGGTGTTTCTCGTGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCA
DNA (76-MER) i 95 NA TGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTCTAAACATAACCTATTATTAATTAATGATTTTTTAAGCCAGTCACAATCTACCAACTTTAT
DNA (61-MER) j 62 NA ATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2017-07-11
Deposition Author(s): Doudna, J.A. , Liu, J.J. , Nogales, E. , Wright, A.V.