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5W3O

Cryoem structure of rhinovirus b14 in complex with c5 fab (33 degrees celsius, molar ratio 1:3, empty particle)

PDB DOI: 10.2210/pdb5w3o/pdb

Classification: VIRUS LIKE PARTICLE/IMMUNE SYSTEM
Organism(s): Desulfuromonas Acetoxidans , Enterobacter Aerogenes

Deposited: 2017-06-08
Deposition Author(s): Dong, Y. , Liu, Y. , Rossmann, M.G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.01 Å

Literature

Cryoem structure of rhinovirus b14 in complex with c5 fab (33 degrees celsius, molar ratio 1:3, empty particle)

Dong, Y. , Liu, Y. , Rossmann, M.G.

Primary Citation of Related Structures: 5W3O


Proteins
Molecule Chains Sequence Length Organism Sequence
C5 antibody variable heavy domain D 116 Desulfuromonas Acetoxidans , Enterobacter Aerogenes AVQLAESGPALVAPSQALSITCTVAGFSLTAYGVAWVRQPPGAGLEWLGAIWAAGATDYNAALKSRASIAKDNSKSQVFLAMASLATADTAAYYCAREWDAYGDYWGQGTTVTVSA
C5 antibody variable light domain E 107 Desulfuromonas Acetoxidans , Enterobacter Aerogenes DIVLTQSPAALSAAAGATVAATCRASGNIHNALAWYQQKAGKSPQLLVYAAAALAAGVPSRFSGSGSGTAYALAINSLAADDFGAYYCQHFWSTPYTFGGGTKLEIK
viral protein 1 A 289 Desulfuromonas Acetoxidans , Enterobacter Aerogenes GLGDELEEVIVEKTKQTVASISSGPKHTQKVPILTANETGATMPVLPSDSIETRTTYMHFNGSETDVECFLGRAACVHVTEIQNKDATGIDNHREAKLFNDWKINLSSLVQLRKKLELFTYVRFDSEYTILATASQPDSANYSSNLVVQAMYVPPGAPNPKEWDDYTWQSASNPSVFFKVGDTSRFSVPYVGLASAYNCFYDGYSHDDAETQYGITVLNHMGSMAFRIVNEHDEHKTLVKIRVYHRAKHVEAWIPRAPRALPYTSIGRTNYPKNTEPVIKKRKGDIKSY
viral protein 3 B 236 Desulfuromonas Acetoxidans , Enterobacter Aerogenes GLPTTTLPGSGQFLTTDDRQSPSALPNYEPTPRIHIPGKVHNLLEIIQVDTLIPMNNTHTKDEVNSYLIPLNANRQNEQVFGTNLFIGDGVFKTTLLGEIVQYYTHWSGSLRFSLMYTGPALSSAKLILAYTPPGARGPQDRREAMLGTHVVWDIGLQSTIVMTIPWTSGVQFRYTDPDTYTSAGFLSCWYQTSLILPPETTGQVYLLSFISACPDFKLRLMKDTQTISQTVALTE
viral protein 2 C 262 Desulfuromonas Acetoxidans , Enterobacter Aerogenes SPNVEACGYSDRVQQITLGNSTITTQEAANAVVCYAEWPEYLPDVDASDVNKTSKPDTSVCRFYTLDSKTWTTGSKGWCWKLPDALKDMGVFGQNMFFHSLGRSGYTVHVQCNATKFHSGCLLVVVIPEHQLASHEGGNVSVKYTFTHPGERGIDLSSANEVGGPVKDVIYNMNGTLLGNLLIFPHQFINLRTNNTATIVIPYINSVPIDSMTRHNNVSLMVIPIAPLTVPTGATPSLPITVTIAPMCTEFSGIRSKSIVPQ
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2017-06-08
Deposition Author(s): Dong, Y. , Liu, Y. , Rossmann, M.G.