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5W2A

Structure of human dna polymerase kappa in complex with lucidin-derived dna adduct and incoming dcmpnpp

PDB DOI: 10.2210/pdb5w2a/pdb

Classification: REPLICATION
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2017-06-06
Deposition Author(s): Jha, V.K. , Ling, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

5w2a
Literature

Structure of human dna polymerase kappa in complex with lucidin-derived dna adduct and incoming dcmpnpp

Jha, V.K. , Ling, H.

Primary Citation of Related Structures: 5W2A


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase kappa A 551 Homo Sapiens , Synthetic Construct MSYYHHHHHHDYDIPTTENLYFQGAMDSTKEKCDSYKDDLLLRMGLNDNKAGMEGLDKEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEEDRKHQQ
DNA polymerase kappa B 551 Homo Sapiens , Synthetic Construct MSYYHHHHHHDYDIPTTENLYFQGAMDSTKEKCDSYKDDLLLRMGLNDNKAGMEGLDKEKINKIIMEATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCPQLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYFIKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQNSVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPNRQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGSTHLTRDGERKSMSVERTFSEINKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKNVNFEVKTRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSFPNEEDRKHQQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*CP*GP*GP*AP*TP*CP*AP*G)-3') c 9 NA GCGGATCAG
DNA (5'-D(P*GP*CP*GP*GP*AP*TP*CP*AP*G)-3') p 9 NA GCGGATCAG
DNA (5'-D(*AP*TP*GP*(LDG)P*CP*TP*GP*AP*TP*CP*CP*GP*C)-3') d 13 NA ATGXCTGATCCGC
DNA (5'-D(*AP*TP*GP*(LDG)P*CP*TP*GP*AP*TP*CP*CP*GP*C)-3') t 13 NA ATGXCTGATCCGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-06-06
Deposition Author(s): Jha, V.K. , Ling, H.