5W1V
Structure of the hla-e-vmaprtlil/gf4 tcr complex
PDB DOI: 10.2210/pdb5w1v/pdb
Classification: IMMUNE SYSTEM Organism(s): Homo Sapiens , Human Herpesvirus 5 Strain Ad169
Deposited: 2017-06-04 Deposition Author(s): Farenc, C. , Gras, S. , Rossjohn, J. , Walpole, N.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.31 Å
Structure of the hla-e-vmaprtlil/gf4 tcr complex
Farenc, C. , Gras, S. , Rossjohn, J. , Walpole, N.
Primary Citation of Related Structures: 5W1V
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| HLA class I histocompatibility antigen, alpha chain E | A | 278 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGCELGPDRRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPAS |
| HLA class I histocompatibility antigen, alpha chain E | F | 278 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGCELGPDRRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPAS |
| HLA class I histocompatibility antigen, alpha chain E | K | 278 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGCELGPDRRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPAS |
| HLA class I histocompatibility antigen, alpha chain E | P | 278 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | GSHSLKYFHTSVSRPGRGEPRFISVGYVDDTQFVRFDNDAASPRMVPRAPWMEQEGSEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHTLQWMHGCELGPDRRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAAQISEQKSNDASEAEHQRAYLEDTCVEWLHKYLEKGKETLLHLEPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQQDGEGHTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPEPVTLRWKPAS |
| Beta-2-microglobulin | B | 100 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | G | 100 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | L | 100 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| Beta-2-microglobulin | Q | 100 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | MIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM |
| VMAPRTLIL peptide from CMV gpUL40 | C | 9 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | VMAPRTLIL |
| VMAPRTLIL peptide from CMV gpUL40 | H | 9 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | VMAPRTLIL |
| VMAPRTLIL peptide from CMV gpUL40 | M | 9 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | VMAPRTLIL |
| VMAPRTLIL peptide from CMV gpUL40 | R | 9 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | VMAPRTLIL |
| GF4 T cell receptor alpha chain | D | 207 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | GQQLNQSPQSMFIQEGEDVSMNCTSSSIFNTWLWYKQDPGEGPVLLIALYKAGELTSNGRLTAQFGITRKDSFLNISASIPSDVGIYFCAGQPLGGSNYKLTFGKGTLLTVNPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS |
| GF4 T cell receptor alpha chain | I | 207 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | GQQLNQSPQSMFIQEGEDVSMNCTSSSIFNTWLWYKQDPGEGPVLLIALYKAGELTSNGRLTAQFGITRKDSFLNISASIPSDVGIYFCAGQPLGGSNYKLTFGKGTLLTVNPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS |
| GF4 T cell receptor alpha chain | N | 207 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | GQQLNQSPQSMFIQEGEDVSMNCTSSSIFNTWLWYKQDPGEGPVLLIALYKAGELTSNGRLTAQFGITRKDSFLNISASIPSDVGIYFCAGQPLGGSNYKLTFGKGTLLTVNPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS |
| GF4 T cell receptor alpha chain | S | 207 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | GQQLNQSPQSMFIQEGEDVSMNCTSSSIFNTWLWYKQDPGEGPVLLIALYKAGELTSNGRLTAQFGITRKDSFLNISASIPSDVGIYFCAGQPLGGSNYKLTFGKGTLLTVNPNIQNPDPAVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDKCVLDMRSMDFKSNSAVAWSNKSDFACANAFNNSIIPEDTFFPSPESS |
| GF4 T cell receptor beta chain | E | 246 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | DSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSANPGDSSNEKLFFGSGTQLSVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
| GF4 T cell receptor beta chain | J | 246 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | DSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSANPGDSSNEKLFFGSGTQLSVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
| GF4 T cell receptor beta chain | O | 246 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | DSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSANPGDSSNEKLFFGSGTQLSVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
| GF4 T cell receptor beta chain | T | 246 | Homo Sapiens , Human Herpesvirus 5 Strain Ad169 | DSGVTQTPKHLITATGQRVTLRCSPRSGDLSVYWYQQSLDQGLQFLIQYYNGEERAKGNILERFSAQQFPDLHSELNLSSLELGDSALYFCASSANPGDSSNEKLFFGSGTQLSVLEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAWGRAD |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-06-04 Deposition Author(s): Farenc, C. , Gras, S. , Rossjohn, J. , Walpole, N.