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FASTA Sequence PDB Format mmCIF Format
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5W0K

Crystal structure of ebv ghgl/cl40/gp42 n-domain

PDB DOI: 10.2210/pdb5w0k/pdb

Classification: VIRAL PROTEIN/Immune system
Organism(s): Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct

Deposited: 2017-05-31
Deposition Author(s): Jardetzky, T.S. , Sathiyamoorthy, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.1 Å

5w0k
Literature

Crystal structure of ebv ghgl/cl40/gp42 n-domain

Jardetzky, T.S. , Sathiyamoorthy, K.

Primary Citation of Related Structures: 5W0K


Proteins
Molecule Chains Sequence Length Organism Sequence
Envelope glycoprotein H A 660 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct LSEVKLHLDIEGHASHYTIPWTELMAKVPGLSPEALWREANVTEDLASMLNRYKLIYKTSGTLGIALAEPVDIPAVSEGSMQVDASKVHPGVISGLNSPACMLSAPLEKQLFYYIGTMLPNTRPHSYVFYQLRCHLSYVALSINGDKFQYTGAMTSKFLMGTYKRVTEKGDEHVLSLVFGKTKDLPDLRGPFSYPSLTSAQSGDYSLVIVTTFVHYANFHNYFVPNLKDMFSRAVTMTAASYARYVLQKLVLLEMKGGCREPELDTETLTTMFEVSVAFFKVGHAVGETGNGCVDLRWLAKSFFELTVLKDIIGICYGATVKGMQSYGLERLAAMLMATVKMEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQGPNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSNAVDGFLGRLSLEREDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIPKIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLYEERAH
Envelope glycoprotein H C 660 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct LSEVKLHLDIEGHASHYTIPWTELMAKVPGLSPEALWREANVTEDLASMLNRYKLIYKTSGTLGIALAEPVDIPAVSEGSMQVDASKVHPGVISGLNSPACMLSAPLEKQLFYYIGTMLPNTRPHSYVFYQLRCHLSYVALSINGDKFQYTGAMTSKFLMGTYKRVTEKGDEHVLSLVFGKTKDLPDLRGPFSYPSLTSAQSGDYSLVIVTTFVHYANFHNYFVPNLKDMFSRAVTMTAASYARYVLQKLVLLEMKGGCREPELDTETLTTMFEVSVAFFKVGHAVGETGNGCVDLRWLAKSFFELTVLKDIIGICYGATVKGMQSYGLERLAAMLMATVKMEELGHLTTEKQEYALRLATVGYPKAGVYSGLIGGATSVLLSAYNRHPLFQPLHTVMRETLFIGSHVVLRELRLNVTTQGPNLALYQLLSTALCSALEIGEVLRGLALGTESGLFSPCYLSLRFDLTRDKLLSMAPQEATLDQAAVSNAVDGFLGRLSLEREDRDAWHLPAYKCVDRLDKVLMIIPLINVTFIISSDREVRGSALYEASTTYLSSSLFLSPVIMNKCSQGAVAGEPRQIPKIQNFTRTQKSCIFCGFALLSYDEKEGLETTTYITSQEVQNSILSSNYFDFDNLHVHYLLLTTNGTVMEIAGLYEERAH
Envelope glycoprotein L B 114 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct WAYPCCHVTQLRAQHLLALENISDIYLVSNQTCDGFSLASLNSPKNGSNQLVISRCANGLNVVSFFISILKRSSSALTGHLRELLTTLETLYGSFSVEDLFGANLNRYAWHRGG
Envelope glycoprotein L D 114 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct WAYPCCHVTQLRAQHLLALENISDIYLVSNQTCDGFSLASLNSPKNGSNQLVISRCANGLNVVSFFISILKRSSSALTGHLRELLTTLETLYGSFSVEDLFGANLNRYAWHRGG
CL40 IgG heavy chain H 217 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct EVKLQQSGAELVMPGASVKMSCKASGYTFTDYWMHWVKQRPGQGLEWIGAIDTSDSYTSYNQKFKGKATLTVDESSSTAYMQLSSLTSEDSAVYYCARGLLPFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD
CL40 IgG heavy chain E 217 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct EVKLQQSGAELVMPGASVKMSCKASGYTFTDYWMHWVKQRPGQGLEWIGAIDTSDSYTSYNQKFKGKATLTVDESSSTAYMQLSSLTSEDSAVYYCARGLLPFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD
CL40 IgG light chain L 213 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAKYFCQQYNSYPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
CL40 IgG light chain F 213 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAKYFCQQYNSYPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
Glycoprotein 42 X 35 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct KPNVEVWPVDPPPPVNFNKTAEQEYGDKEVKLPHW
Glycoprotein 42 Y 35 Human Herpesvirus 4 (Strain B95-8) , Mus Musculus , Synthetic Construct KPNVEVWPVDPPPPVNFNKTAEQEYGDKEVKLPHW
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-05-31
Deposition Author(s): Jardetzky, T.S. , Sathiyamoorthy, K.