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FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5VVK

Cas1-cas2 bound to full-site mimic

PDB DOI: 10.2210/pdb5vvk/pdb

Classification: HYDROLASE/DNA
Organism(s): Escherichia Coli (Strain K12) , Synthetic Construct

Deposited: 2017-05-19
Deposition Author(s): Doudna, J.A. , Doxzen, K.D. , Knott, G.J. , Wright, A.V.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.9 Å

5vvk
Literature

Cas1-cas2 bound to full-site mimic

Doudna, J.A. , Doxzen, K.D. , Knott, G.J. , Wright, A.V.

Primary Citation of Related Structures: 5VVK


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease Cas1 A 308 Escherichia Coli (Strain K12) , Synthetic Construct SFTMTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
CRISPR-associated endonuclease Cas1 B 308 Escherichia Coli (Strain K12) , Synthetic Construct SFTMTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
CRISPR-associated endonuclease Cas1 C 308 Escherichia Coli (Strain K12) , Synthetic Construct SFTMTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
CRISPR-associated endonuclease Cas1 D 308 Escherichia Coli (Strain K12) , Synthetic Construct SFTMTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
CRISPR-associated endoribonuclease Cas2 E 94 Escherichia Coli (Strain K12) , Synthetic Construct MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV
CRISPR-associated endoribonuclease Cas2 F 94 Escherichia Coli (Strain K12) , Synthetic Construct MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*GP*CP*CP*CP*CP*AP*GP*TP*AP*GP*C)-3') g 11 NA GCCCCAGTAGC
DNA (5'-D(*GP*AP*CP*CP*AP*CP*CP*AP*GP*TP*G)-3') h 11 NA GACCACCAGTG
DNA (58-MER) j 58 NA CACTGGTGGTCGCCGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTAAGATATTAGA
DNA (58-MER) k 58 NA GCTACTGGGGCCGAGGGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATATGCTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-05-19
Deposition Author(s): Doudna, J.A. , Doxzen, K.D. , Knott, G.J. , Wright, A.V.