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5VMW

Kaiso (zbtb33) zinc finger dna binding domain in complex with a double cpg-methylated dna resembling the specific kaiso binding sequence (kbs)

PDB DOI: 10.2210/pdb5vmw/pdb

Classification: TRANSCRIPTION/DNA
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2017-04-28
Deposition Author(s): Dyson, H.J. , Martinez-Yamout, M.A. , Nikolova, E.N. , Stanfield, R.L. , Wright, P.E.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.397 Å

5vmw
Literature

Kaiso (zbtb33) zinc finger dna binding domain in complex with a double cpg-methylated dna resembling the specific kaiso binding sequence (kbs)

Dyson, H.J. , Martinez-Yamout, M.A. , Nikolova, E.N. , Stanfield, R.L. , Wright, P.E.

Primary Citation of Related Structures: 5VMW


Proteins
Molecule Chains Sequence Length Organism Sequence
Transcriptional regulator Kaiso A 134 Homo Sapiens , Synthetic Construct MANKRMKVKHDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYAYLSDRS

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*TP*GP*CP*TP*TP*CP*CP*(5CM)P*GP*(5CM)P*GP*AP*AP*TP*AP*AP*CP*G)-3') d 18 NA TGCTTCCCGCGAATAACG
DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*(5CM)P*GP*(5CM)P*GP*GP*GP*AP*AP*GP*CP*A)-3') e 18 NA CGTTATTCGCGGGAAGCA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-04-28
Deposition Author(s): Dyson, H.J. , Martinez-Yamout, M.A. , Nikolova, E.N. , Stanfield, R.L. , Wright, P.E.