5VFX
Structure of an accessory protein of the pcw3 relaxosome in complex with the origin of transfer (orit) dna
PDB DOI: 10.2210/pdb5vfx/pdb
Classification: DNA BINDING PROTEIN/DNA Organism(s): Clostridium Perfringens , Synthetic Construct
Deposited: 2017-04-10 Deposition Author(s): Adams, V. , Conroy, P.J. , Flanigan, S.F. , Griffin, M.D.W. , Lao, C. , Mok, Y.-F. , Panjikar, S. , Rood, J.I. , Traore, D.A.K. , Whisstock, J.C. , Wisniewski, J.A.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 2.81 Å
Structure of an accessory protein of the pcw3 relaxosome in complex with the origin of transfer (orit) dna
Adams, V. , Conroy, P.J. , Flanigan, S.F. , Griffin, M.D.W. , Lao, C. , Mok, Y.-F. , Panjikar, S. , Rood, J.I. , Traore, D.A.K. , Whisstock, J.C. , Wisniewski, J.A.
Primary Citation of Related Structures: 5VFX
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| TcpK | A | 107 | Clostridium Perfringens , Synthetic Construct | QNSHMVKDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYLE |
| TcpK | B | 107 | Clostridium Perfringens , Synthetic Construct | QNSHMVKDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYLE |
| TcpK | C | 107 | Clostridium Perfringens , Synthetic Construct | QNSHMVKDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYLE |
| TcpK | D | 107 | Clostridium Perfringens , Synthetic Construct | QNSHMVKDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYLE |
| TcpK | E | 107 | Clostridium Perfringens , Synthetic Construct | QNSHMVKDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYLE |
| TcpK | F | 107 | Clostridium Perfringens , Synthetic Construct | QNSHMVKDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYLE |
| TcpK | G | 107 | Clostridium Perfringens , Synthetic Construct | QNSHMVKDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYLE |
| TcpK | H | 107 | Clostridium Perfringens , Synthetic Construct | QNSHMVKDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDTVDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLYLE |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| oriT | i | 23 | NA | AAGGAACTTTACAGGGAACTTTA |
| oriT | k | 23 | NA | AAGGAACTTTACAGGGAACTTTA |
| oriT | n | 23 | NA | AAGGAACTTTACAGGGAACTTTA |
| oriT | o | 23 | NA | AAGGAACTTTACAGGGAACTTTA |
| oriT | j | 23 | NA | TAAAGTTCCCTGTAAAGTTCCTT |
| oriT | l | 23 | NA | TAAAGTTCCCTGTAAAGTTCCTT |
| oriT | m | 23 | NA | TAAAGTTCCCTGTAAAGTTCCTT |
| oriT | p | 23 | NA | TAAAGTTCCCTGTAAAGTTCCTT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2017-04-10 Deposition Author(s): Adams, V. , Conroy, P.J. , Flanigan, S.F. , Griffin, M.D.W. , Lao, C. , Mok, Y.-F. , Panjikar, S. , Rood, J.I. , Traore, D.A.K. , Whisstock, J.C. , Wisniewski, J.A.