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5UZ9
Cryo em structure of anti-crisprs, acrf1 and acrf2, bound to type i-f crrna-guided crispr surveillance complex
PDB DOI: 10.2210/pdb5uz9/pdb
Classification: IMMUNE SYSTEM/RNA Organism(s): Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct
Deposited: 2017-02-25 Deposition Author(s): Bondy-Denomy, J. , Carter, J. , Chowdhury, S. , Davidson, A.R. , Fischer, E.R. , Hoffmann, C. , Jackson, R.N. , Lander, G.C. , Maxwell, K.L. , Nosaka, L. , Rollins, M.F. , Wiedenheft, B.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 3.4 Å
Cryo em structure of anti-crisprs, acrf1 and acrf2, bound to type i-f crrna-guided crispr surveillance complex
Bondy-Denomy, J. , Carter, J. , Chowdhury, S. , Davidson, A.R. , Fischer, E.R. , Hoffmann, C. , Jackson, R.N. , Lander, G.C. , Maxwell, K.L. , Nosaka, L. , Rollins, M.F. , Wiedenheft, B.
Primary Citation of Related Structures: 5UZ9
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR-associated protein Csy1 | A | 434 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | MTSPLPTPTWQELRQFIESFIQERLQGKLDKLQPDEDDKRQTLLATHRREAWLADAARRVGQLQLVTHTLKPIHPDARGSNLHSLPQAPGQPGLAGSHELGDRLVSDVVGNAAALDVFKFLSLQYQGKNLLNWLTEDSAEALQALSDNAEQAREWRQAFIGITTVKGAPASHSLAKQLYFPLPGSGYHLLAPLFPTSLVHHVHALLREARFGDAAKAAREARSRQESWPHGFSEYPNLAIQKFGGTKPQNISQLNNERRGENWLLPSLPPNWQRQNVNAPMRHSSVFEHDFGRTPEVSRLTRTLQRFLAKTVHNNLAIRQRRAQLVAQICDEALQYAARLRELEPGWSATPGCQLHDAEQLWLDPLRAQTDETFLQRRLRGDWPAEVGNRFANWLNRAVSSDSQILGSPEAAQWSQELSKELTMFKEILEDERD |
| CRISPR-associated protein Csy2 | B | 327 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | MSVTDPEALLLLPRLSIQNANAISSPLTWGFPSPGAFTGFVHALQRRVGISLDIELDGVGIVCHRFEAQISQPAGKRTKVFNLTRNPLNRDGSTAAIVEEGRAHLEVSLLLGVHGDGLDDHPAQEIARQVQEQAGAMRLAGGSILPWCNERFPAPNAELLMLGGSDEQRRKNQRRLTRRLLPGFALVSREALLQQHLETLRTTLPEATTLDALLDLCRINFEPPATSSEEEASPPDAAWQVRDKPGWLVPIPAGYNALSPLYLPGEVRNARDRETPLRFVENLFGLGEWLSPHRVAALSDLLWYHHAEPDKGLYRWSTPRFVEHAIA |
| CRISPR-associated protein Csy3 | C | 341 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | SKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK |
| CRISPR-associated protein Csy3 | D | 341 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | SKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK |
| CRISPR-associated protein Csy3 | E | 341 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | SKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK |
| CRISPR-associated protein Csy3 | F | 341 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | SKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK |
| CRISPR-associated protein Csy3 | G | 341 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | SKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK |
| CRISPR-associated protein Csy3 | H | 341 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | SKPILSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSVRGTISNRLKTKDRDPAKLDASIQSPNLQTVDVANLPSDADTLKVRFTLRVLGGAGTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARAWRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELILDKGDKKGQKSKTLYSVRDAAAIHSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHYVIANLIRGGVFGEAEEK |
| Anti-CRISPR protein Acr30-35 | I | 77 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | KFIKYLSTAHLNYMNIAVYENGSKIKARVENVVNGKSVGARDFDSTEQLESWFYGLPGSGLGRIENAMNEISRRENP |
| Anti-CRISPR protein Acr30-35 | J | 77 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | KFIKYLSTAHLNYMNIAVYENGSKIKARVENVVNGKSVGARDFDSTEQLESWFYGLPGSGLGRIENAMNEISRRENP |
| Anti-CRISPR protein 30 | K | 96 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | MHHHHHHIAQQHKDTVAACEAAEAIAIAKDQVWDGEGYTKYTFDDNSVLIQSGTTQYAMDADDADSIKGYADWLDDEARSAEASEIERLLESVEEE |
| CRISPR-associated endonuclease Cas6/Csy4 | L | 189 | Pseudomonas Aeruginosa (Strain Ucbpp-Pa14) , Pseudomonas Phage D3112 , Pseudomonas Phage Jbd30 , Synthetic Construct | FTMDHYLDIRLRPDPEFPPAQLMCVLFGKLHQALVAQGGDRIGVSFPDLDESRSRLGERLRIHASADDLRALLARPWLEGLRDHLQFGEPAVVPHPTPYRQVSRVQAKSNPERLRRRLMRRHDLSEEEARKRIPDTVARALDLPFVTLRSQSTGQHFRLFIRHGPLQVTAEEGGFTCYGLSKGGFVPWF |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR RNA (60-MER) | m | 60 | NA | CUAAGAAAUUCACGGCGGGCUUGAUGUCCGCGUCUACCUGGUUCACUGCCGUAUAGGCAG |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2017-02-25 Deposition Author(s): Bondy-Denomy, J. , Carter, J. , Chowdhury, S. , Davidson, A.R. , Fischer, E.R. , Hoffmann, C. , Jackson, R.N. , Lander, G.C. , Maxwell, K.L. , Nosaka, L. , Rollins, M.F. , Wiedenheft, B.