5UPW
Cryoem structure refinement by integrating nmr chemical shifts with molecular dynamics simulations
PDB DOI: 10.2210/pdb5upw/pdb
Classification: VIRAL PROTEIN Organism(s): Human Immunodeficiency Virus Type 1 (New York-5 Isolate)
Deposited: 2017-02-04 Deposition Author(s): Perilla, J.R.
Experimental Data Snapshot
Method: ELECTRON MICROSCOPY Resolution: 5.0 Å
Cryoem structure refinement by integrating nmr chemical shifts with molecular dynamics simulations
Primary Citation of Related Structures: 5UPW
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| Gag polyprotein | A | 221 | Human Immunodeficiency Virus Type 1 (New York-5 Isolate) | PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGV |
| Gag polyprotein | B | 221 | Human Immunodeficiency Virus Type 1 (New York-5 Isolate) | PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGV |
| Gag polyprotein | C | 221 | Human Immunodeficiency Virus Type 1 (New York-5 Isolate) | PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGV |
| Gag polyprotein | D | 221 | Human Immunodeficiency Virus Type 1 (New York-5 Isolate) | PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGV |
| Gag polyprotein | E | 221 | Human Immunodeficiency Virus Type 1 (New York-5 Isolate) | PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGV |
| Gag polyprotein | F | 221 | Human Immunodeficiency Virus Type 1 (New York-5 Isolate) | PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGV |
Experimental Data
Method: ELECTRON MICROSCOPY
Deposited Date: 2017-02-04 Deposition Author(s): Perilla, J.R.