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5UM8

Crystal structure of hiv-1 envelope trimer 16055 nfl td cc (t569g) in complex with fabs 35022 and pgt124

PDB DOI: 10.2210/pdb5um8/pdb

Classification: Viral Protein/Immune System
Organism(s): Homo Sapiens , Human Immunodeficiency Virus 1

Deposited: 2017-01-26
Deposition Author(s): Garces, F. , Stanfield, R.L. , Wilson, I.A.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.935 Å

5um8
Literature

Crystal structure of hiv-1 envelope trimer 16055 nfl td cc (t569g) in complex with fabs 35022 and pgt124

Garces, F. , Stanfield, R.L. , Wilson, I.A.

Primary Citation of Related Structures: 5UM8


Proteins
Molecule Chains Sequence Length Organism Sequence
glycoprotein gp120 G 485 Homo Sapiens , Human Immunodeficiency Virus 1 NGNLWVTVYYGVPVWKDAETTLFCASDAKAYEKEKHNVWATHACVPTDPNPQEMVLENVTENFNMWKNDMVEQMHTDVISLWDQSLKPCVKLTPLCVTLECRQVNTTNATSSVNVTNGEEIKNCSFNATTELRDKKQKVYALFYRLDIVPLEEERKGNSSKYRLINCNTSACTQACPKVTFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNVKTIIVHLNESVEIVCTRPNNNTRKSIRIGPGQTFYATGDIIGNIRQAYCNISKDDWIRTLQRVGKKLAEHFPRRIINFTSPAGGDLEITTHSFNCRGEFFYCNTSSLFNSTYNPNDTNSNSSSSNSSLDITIPCRIKQIINMWQRVGQCMYAPPIEGNITCKSNITGLLLVRDGGVESNETEIFRPGGGDMRNNWRSELYKYKVVEIKPLGIAPTRAKRRVVEGGGGSGGGGS
glycoprotein gp41 B 153 Homo Sapiens , Human Immunodeficiency Virus 1 AVGLGAVIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAPEAQQHLLQLGVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSHDEIWGNMTWMQWDREISNYTNTIYRLLEDSQNQQEQNEKDLLALD
Fab PGT124 light chain L 214 Homo Sapiens , Human Immunodeficiency Virus 1 SYVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
Fab PGT124 heavy chain H 236 Homo Sapiens , Human Immunodeficiency Virus 1 QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
Fab 35022 heavy chain D 240 Homo Sapiens , Human Immunodeficiency Virus 1 EGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEV
Fab 35022 light chain E 216 Homo Sapiens , Human Immunodeficiency Virus 1 QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-01-26
Deposition Author(s): Garces, F. , Stanfield, R.L. , Wilson, I.A.