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5UKR

Structure of unliganded anti-gp120 cd4bs antibody dh522.2 fab in complex with a gp120 core

PDB DOI: 10.2210/pdb5ukr/pdb

Classification: IMMUNE SYSTEM
Organism(s): Human Immunodeficiency Virus 1 , Macaca Mulatta

Deposited: 2017-01-23
Deposition Author(s): Nicely, N.I.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.712 Å

5ukr
Literature

Structure of unliganded anti-gp120 cd4bs antibody dh522.2 fab in complex with a gp120 core

Nicely, N.I.

Primary Citation of Related Structures: 5UKR


Proteins
Molecule Chains Sequence Length Organism Sequence
DH522.2 Fab fragment heavy chain H 230 Human Immunodeficiency Virus 1 , Macaca Mulatta QVQLQESGPGLVKPSETLSLTCAVSGGSIGDDYYWNWIRQSPGKGLEWIGSIYGSFGGTNFNPSLKNRVTISMDTSNNQVSLKLNSVTAADTAVYYCARGSHSIVVLFGYYFDYWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGG
DH522.2 Fab fragment light chain L 216 Human Immunodeficiency Virus 1 , Macaca Mulatta QSALTQPPSVSKSLGQSVTISCSGTTNDIGAYNGVSWYQHHSDTAPRLLIYEVNKRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCGSYRSGSTWVFGGGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGVVKVAWKADGSAVNAGVETTTPSKQSNNKYAASSYLSLTSDQWKSHKSYSCQVTHEGSTVEKTVAPAECS
Chimeric B.YU2 gp120 core derived from HIV-1 Env G 313 Human Immunodeficiency Virus 1 , Macaca Mulatta GARSEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLNESVVINCTGAGHCNLSKTQWENTLEQIAIKLKEQFGNNKTIIFNPSSGGDPEIVTHSFNCGGEFFYCNSTQLFTWNDTRKLNNTGRNITLPCRIKQIINMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGKDTNGTEIFRPGGGDMRDNWRSELYKYKVVKIE
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-01-23
Deposition Author(s): Nicely, N.I.