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FASTA Sequence PDB Format mmCIF Format
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5UK4

Vesicular stomatits virus n protein in complex with inhibitory nanobody 1307

PDB DOI: 10.2210/pdb5uk4/pdb

Classification: Viral Protein/RNA/Immune System
Organism(s): Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos

Deposited: 2017-01-19
Deposition Author(s): Hanke, L. , Knockenhauer, K.E. , Ploegh, H.L. , Schwartz, T.U.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.204 Å

5uk4
Literature

Vesicular stomatits virus n protein in complex with inhibitory nanobody 1307

Hanke, L. , Knockenhauer, K.E. , Ploegh, H.L. , Schwartz, T.U.

Primary Citation of Related Structures: 5UK4


Proteins
Molecule Chains Sequence Length Organism Sequence
Anti-vesicular stomatitis virus N VHH P 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH B 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH Q 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH C 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH R 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH D 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH S 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH E 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH T 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH K 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH L 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH N 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH M 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH F 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH G 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH H 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH I 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH O 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH J 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH
Anti-vesicular stomatitis virus N VHH A 139 Vesicular Stomatitis Indiana Virus (Strain San Juan) , Vicugna Pacos QVQLVETGGGLVQTGGSLRLSCKASGRTFSNSIMGWFRQAPGKERDFVAKISWRNDYTTYADSVKGRFTISRDNASNMVYLLMNNLKPEDTAVYYCAATKAYNGGETSGRGFYYWGQGTQVTVSSGGLPETGGHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (45-MER) u 45 NA UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
RNA (45-MER) v 45 NA UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
RNA (45-MER) w 45 NA UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
RNA (45-MER) x 45 NA UUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUUU
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-01-19
Deposition Author(s): Hanke, L. , Knockenhauer, K.E. , Ploegh, H.L. , Schwartz, T.U.