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5UK0

Cryoem structure of an influenza virus receptor-binding site antibody-antigen interface - class 2

PDB DOI: 10.2210/pdb5uk0/pdb

Classification: VIRAL PROTEIN/IMMUNE SYSTEM
Organism(s): Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1))

Deposited: 2017-01-19
Deposition Author(s): Caradonna, T. , Grigorieff, N. , Harrison, S.C. , Jenni, S. , Liu, Y. , Pan, J. , Raymond, D.D. , Schmidt, A.G.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.8 Å

5uk0
Literature

Cryoem structure of an influenza virus receptor-binding site antibody-antigen interface - class 2

Caradonna, T. , Grigorieff, N. , Harrison, S.C. , Jenni, S. , Liu, Y. , Pan, J. , Raymond, D.D. , Schmidt, A.G.

Primary Citation of Related Structures: 5UK0


Proteins
Molecule Chains Sequence Length Organism Sequence
Hemagglutinin HA1 A 323 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) EDTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHTENAYVSVVSSHYSRKFTPEIAKRPKVRDREGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
Hemagglutinin HA1 C 323 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) EDTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHTENAYVSVVSSHYSRKFTPEIAKRPKVRDREGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
Hemagglutinin HA1 E 323 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) EDTICIGYHANNSTDTVDTVLEKNVTVTHSVNLLEDSHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISRESWSYIVEKPNPENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTTTGVSASCSHNGESSFYKNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIGDQRALYHTENAYVSVVSSHYSRKFTPEIAKRPKVRDREGRINYYWTLLEPGDTIIFEANGNLIAPRYAFALSRGFGSGIINSNAPMDECDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSAKLRMVTGLRNIPS
Hemagglutinin HA2 B 173 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKI
Hemagglutinin HA2 D 173 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKI
Hemagglutinin HA2 F 173 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) GLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKSTQNAINGITNKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELLVLLENERTLDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTYDYPKYSEESKLNREKI
scFV G 266 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) EIVLTQSPGTLSLSPGERATLSCRASQSISGYYLTWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGISPVITFGGGTNVEIKGGGGGSGGGGSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTFNIYDMHWVRQAPGKGLEWVSGLTTGGDTSYSGSVRGRFSISRENAKNSLYLQMNNLRAGDTAAYFCVRGVREVGATGGDPFYYAMAVWGQGTTVTVSSASGSSGSGHHHHHH
scFV H 266 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) EIVLTQSPGTLSLSPGERATLSCRASQSISGYYLTWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGISPVITFGGGTNVEIKGGGGGSGGGGSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTFNIYDMHWVRQAPGKGLEWVSGLTTGGDTSYSGSVRGRFSISRENAKNSLYLQMNNLRAGDTAAYFCVRGVREVGATGGDPFYYAMAVWGQGTTVTVSSASGSSGSGHHHHHH
scFV I 266 Homo Sapiens , Influenza A Virus , Influenza A Virus (A/Solomon Islands/3/2006(H1N1)) EIVLTQSPGTLSLSPGERATLSCRASQSISGYYLTWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGISPVITFGGGTNVEIKGGGGGSGGGGSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTFNIYDMHWVRQAPGKGLEWVSGLTTGGDTSYSGSVRGRFSISRENAKNSLYLQMNNLRAGDTAAYFCVRGVREVGATGGDPFYYAMAVWGQGTTVTVSSASGSSGSGHHHHHH
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2017-01-19
Deposition Author(s): Caradonna, T. , Grigorieff, N. , Harrison, S.C. , Jenni, S. , Liu, Y. , Pan, J. , Raymond, D.D. , Schmidt, A.G.