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5UGP

Dna polymerase beta complex with a 1nt gap and dcmppnp

PDB DOI: 10.2210/pdb5ugp/pdb

Classification: Transferase/DNA
Organism(s): Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2017-01-09
Deposition Author(s): Beard, W.A. , Freudenthal, B.D. , Wilson, S.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.955 Å

Literature

Dna polymerase beta complex with a 1nt gap and dcmppnp

Beard, W.A. , Freudenthal, B.D. , Wilson, S.H.

Primary Citation of Related Structures: 5UGP


Proteins
Molecule Chains Sequence Length Organism Sequence
DNA polymerase beta A 335 Salmonella Enterica , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*GP*TP*CP*GP*G)-3') d 5 NA GTCGG
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*C)-3') p 10 NA GCTGATGCGC
DNA (5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3') t 16 NA CCGACGGCGCATCAGC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2017-01-09
Deposition Author(s): Beard, W.A. , Freudenthal, B.D. , Wilson, S.H.