PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5U98

The crystal structure of a self-peptide complexed to abacavir and hla-b*57:01

PDB DOI: 10.2210/pdb5u98/pdb

Classification: IMMUNE SYSTEM
Organism(s): Homo Sapiens , Synthetic Construct

Deposited: 2016-12-15
Deposition Author(s): Bracey, A.W. , Buus, A.S. , Buus, S. , Jakoncic, J. , Ostrov, D.A. , Pompeu, Y.A. , Schutte, R.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2 Å

5u98
Literature

The crystal structure of a self-peptide complexed to abacavir and hla-b*57:01

Bracey, A.W. , Buus, A.S. , Buus, S. , Jakoncic, J. , Ostrov, D.A. , Pompeu, Y.A. , Schutte, R.J.

Primary Citation of Related Structures: 5U98


Proteins
Molecule Chains Sequence Length Organism Sequence
HLA class I histocompatibility antigen, B-57 alpha chain A 277 Homo Sapiens , Synthetic Construct MGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP
HLA class I histocompatibility antigen, B-57 alpha chain D 277 Homo Sapiens , Synthetic Construct MGSHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPWIEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGCDVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAARVAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP
Beta-2-microglobulin B 99 Homo Sapiens , Synthetic Construct IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
Beta-2-microglobulin E 99 Homo Sapiens , Synthetic Construct IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDM
VAL-THR-THR-ASP-ILE-GLN-VAL-LYS-VAL C 9 Homo Sapiens , Synthetic Construct VTTDIQVKV
VAL-THR-THR-ASP-ILE-GLN-VAL-LYS-VAL F 9 Homo Sapiens , Synthetic Construct VTTDIQVKV
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-12-15
Deposition Author(s): Bracey, A.W. , Buus, A.S. , Buus, S. , Jakoncic, J. , Ostrov, D.A. , Pompeu, Y.A. , Schutte, R.J.