5U33
Crystal structure of aacc2c1-sgrna-extended non-target dna ternary complex
PDB DOI: 10.2210/pdb5u33/pdb
Classification: HYDROLASE/DNA Organism(s): Alicyclobacillus Acidoterrestris (Strain Atcc 49025 / Dsm 3922 / Cip 106132 / Ncimb 13137 / Gd3B) , Synthetic Construct
Deposited: 2016-12-01 Deposition Author(s): Gao, P. , Patel, D.J. , Rajashankar, K.R. , Yang, H.
Experimental Data Snapshot
Method: X-RAY DIFFRACTION Resolution: 3.75 Å
Crystal structure of aacc2c1-sgrna-extended non-target dna ternary complex
Gao, P. , Patel, D.J. , Rajashankar, K.R. , Yang, H.
Primary Citation of Related Structures: 5U33
| Proteins | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| CRISPR-associated endonuclease C2c1 | A | 1130 | Alicyclobacillus Acidoterrestris (Strain Atcc 49025 / Dsm 3922 / Cip 106132 / Ncimb 13137 / Gd3B) , Synthetic Construct | SMAVKSIKVKLRLDDMPEIRAGLWKLHKEVNAGVRYYTEWLSLLRQENLYRRSPNGDGEQECDKTAEECKAELLERLRARQVENGHRGPAGSDDELLQLARQLYELLVPQAIGAKGDAQQIARKFLSPLADKDAVGGLGIAKAGNKPRWVRMREAGEPGWEEEKEKAETRKSADRTADVLRALADFGLKPLMRVYTDSEMSSVEWKPLRKGQAVRTWDRDMFQQAIERMMSWESWNQRVGQEYAKLVEQKNRFEQKNFVGQEHLVHLVNQLQQDMKEASPGLESKEQTAHYVTGRALRGSDKVFEKWGKLAPDAPFDLYDAEIKNVQRRNTRRFGSHDLFAKLAEPEYQALWREDASFLTRYAVYNSILRKLNHAKMFATFTLPDATAHPIWTRFDKLGGNLHQYTFLFNEFGERRHAIRFHKLLKVENGVAREVDDVTVPISMSEQLDNLLPRDPNEPIALYFRDYGAEQHFTGEFGGAKIQCRRDQLAHMHRRRGARDVYLNVSVRVQSQSEARGERRPPYAAVFRLVGDNHRAFVHFDKLSDYLAEHPDDGKLGSEGLLSGLRVMSVALGLRTSASISVFRVARKDELKPNSKGRVPFFFPIKGNDNLVAVHERSQLLKLPGETESKDLRAIREERQRTLRQLRTQLAYLRLLVRCGSEDVGRRERSWAKLIEQPVDAANHMTPDWREAFENELQKLKSLHGICSDKEWMDAVYESVRRVWRHMGKQVRDWRKDVRSGERPKIRGYAKDVVGGNSIEQIEYLERQYKFLKSWSFFGKVSGQVIRAEKGSRFAITLREHIDHAKEDRLKKLADRIIMEALGYVYALDERGKGKWVAKYPPCQLILLAELSEYQFNNDRPPSENNQLMQWSHRGVFQELINQAQVHDLLVGTMYAAFSSRFDARTGAPGIRCRRVPARCTQEHNPEPFPWWLNKFVVEHTLDACPLRADDLIPTGEGEIFVSPFSAEEGDFHQIHAALNAAQNLQQRLWSDFDISQIRLRCDWGEVDGELVLIPRLTGKRTADSYSNKVFYTNTGVTYYERERGKKRRKVFAQEKLSEEEAELLVEADEAREKSVVLMRDPSGIINRGNWTRQKEFWSMVNQRIEGYLVKQIRSRVPLQDSACENTGDI |
| Nucleic Acids / Hybrid | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Sequence |
| sgRNA | b | 112 | NA | GGUCUAGAGGACAGAAUUUUUCAACGGGUGUGCCAAUGGCCACUUUCCAGGUGGCAAAGCCCGUUGAGCUUCUCAAAUCUGAGAAGUGGCACCAGAACCGGAGGACAAAGUC |
| Target DNA strand | c | 28 | NA | GACTTTGTCCTCCGGTTCTGGAACCACA |
| Non-target DNA strand | d | 28 | NA | TGTGGTTCTTTTTTTTTTTTTTTTTTTT |
Experimental Data
Method: X-RAY DIFFRACTION
Deposited Date: 2016-12-01 Deposition Author(s): Gao, P. , Patel, D.J. , Rajashankar, K.R. , Yang, H.