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FASTA Sequence PDB Format mmCIF Format
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5U31

Crystal structure of aacc2c1-sgrna-8mer substrate dna ternary complex

PDB DOI: 10.2210/pdb5u31/pdb

Classification: HYDROLASE/DNA
Organism(s): Alicyclobacillus Acidoterrestris , Synthetic Construct

Deposited: 2016-12-01
Deposition Author(s): Gao, P. , Patel, D.J. , Rajashankar, K.R. , Yang, H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.89 Å

Literature

Crystal structure of aacc2c1-sgrna-8mer substrate dna ternary complex

Gao, P. , Patel, D.J. , Rajashankar, K.R. , Yang, H.

Primary Citation of Related Structures: 5U31


Proteins
Molecule Chains Sequence Length Organism Sequence
CRISPR-associated endonuclease C2c1 A 1130 Alicyclobacillus Acidoterrestris , Synthetic Construct SMAVKSIKVKLRLDDMPEIRAGLWKLHKEVNAGVRYYTEWLSLLRQENLYRRSPNGDGEQECDKTAEECKAELLERLRARQVENGHRGPAGSDDELLQLARQLYELLVPQAIGAKGDAQQIARKFLSPLADKDAVGGLGIAKAGNKPRWVRMREAGEPGWEEEKEKAETRKSADRTADVLRALADFGLKPLMRVYTDSEMSSVEWKPLRKGQAVRTWDRDMFQQAIERMMSWESWNQRVGQEYAKLVEQKNRFEQKNFVGQEHLVHLVNQLQQDMKEASPGLESKEQTAHYVTGRALRGSDKVFEKWGKLAPDAPFDLYDAEIKNVQRRNTRRFGSHDLFAKLAEPEYQALWREDASFLTRYAVYNSILRKLNHAKMFATFTLPDATAHPIWTRFDKLGGNLHQYTFLFNEFGERRHAIRFHKLLKVENGVAREVDDVTVPISMSEQLDNLLPRDPNEPIALYFRDYGAEQHFTGEFGGAKIQCRRDQLAHMHRRRGARDVYLNVSVRVQSQSEARGERRPPYAAVFRLVGDNHRAFVHFDKLSDYLAEHPDDGKLGSEGLLSGLRVMSVALGLRTSASISVFRVARKDELKPNSKGRVPFFFPIKGNDNLVAVHERSQLLKLPGETESKDLRAIREERQRTLRQLRTQLAYLRLLVRCGSEDVGRRERSWAKLIEQPVDAANHMTPDWREAFENELQKLKSLHGICSDKEWMDAVYESVRRVWRHMGKQVRDWRKDVRSGERPKIRGYAKDVVGGNSIEQIEYLERQYKFLKSWSFFGKVSGQVIRAEKGSRFAITLREHIDHAKEDRLKKLADRIIMEALGYVYALDERGKGKWVAKYPPCQLILLAELSEYQFNNDRPPSENNQLMQWSHRGVFQELINQAQVHDLLVGTMYAAFSSRFDARTGAPGIRCRRVPARCTQEHNPEPFPWWLNKFVVEHTLDACPLRADDLIPTGEGEIFVSPFSAEEGDFHQIHAALNAAQNLQQRLWSDFDISQIRLRCDWGEVDGELVLIPRLTGKRTADSYSNKVFYTNTGVTYYERERGKKRRKVFAQEKLSEEEAELLVEADEAREKSVVLMRDPSGIINRGNWTRQKEFWSMVNQRIEGYLVKQIRSRVPLQDSACENTGDI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
sgRNA b 112 NA GGUCUAGAGGACAGAAUUUUUCAACGGGUGUGCCAAUGGCCACUUUCCAGGUGGCAAAGCCCGUUGAGCUUCUCAAAUCUGAGAAGUGGCACCAGAACCGGAGGACAAAGUC
Target DNA strand c 28 NA GACTTTGTCCTCCGGTTCTGGAACCACA
Non-target DNA strand d 8 NA TGTGGTTC
Non-target DNA strand e 8 NA TGTGGTTC
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-12-01
Deposition Author(s): Gao, P. , Patel, D.J. , Rajashankar, K.R. , Yang, H.