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FASTA Sequence PDB Format mmCIF Format
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5TVP

Sumo2 bound to mouse tdp2 catalytic domain with a 5'-phosphorylated dna ternary complex

PDB DOI: 10.2210/pdb5tvp/pdb

Classification: hydrolase/dna
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2016-11-09
Deposition Author(s): Schellenberg, M.J. , Williams, R.S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.399 Å

Literature

Sumo2 bound to mouse tdp2 catalytic domain with a 5'-phosphorylated dna ternary complex

Schellenberg, M.J. , Williams, R.S.

Primary Citation of Related Structures: 5TVP


Proteins
Molecule Chains Sequence Length Organism Sequence
Tyrosyl-DNA phosphodiesterase 2 I 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 O 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 E 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 G 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 B 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 A 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 K 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Tyrosyl-DNA phosphodiesterase 2 M 256 Mus Musculus , Synthetic Construct SKGLEDSSTISFITWNIDGLDGCNLPERARGVCSCLALYSPDVVFLQEVIPPYCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLGGNEFCLMTSHLESTREHSAERIRQLKTVLGKMQEAPDSTTVIFAGDTNLRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYTWDTKANNNLRIPAAYKHRFDRIFFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNVVL
Small ubiquitin-related modifier 2 Q 81 Mus Musculus , Synthetic Construct SNVKTENNDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQ

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') j 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') p 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') f 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') h 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') c 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') d 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') l 9 NA CCGAATTCG
DNA (5'-D(P*CP*CP*GP*AP*AP*TP*TP*CP*G)-3') n 9 NA CCGAATTCG
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-11-09
Deposition Author(s): Schellenberg, M.J. , Williams, R.S.