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5TRD

Structure of rbkr (riboflavin kinase) from thermoplasma acidophilum determined in complex with ctp and its cognate dna operator

PDB DOI: 10.2210/pdb5trd/pdb

Classification: TRANSFERASE/DNA
Organism(s): Achromobacter Denitrificans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.)

Deposited: 2016-10-26
Deposition Author(s): Almo, S.C. , Li, X. , Osterman, A.L. , Rodionov, D.A. , Rodionova, I.A. , Vetting, M.W.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.85 Å

5trd
Literature

Structure of rbkr (riboflavin kinase) from thermoplasma acidophilum determined in complex with ctp and its cognate dna operator

Almo, S.C. , Li, X. , Osterman, A.L. , Rodionov, D.A. , Rodionova, I.A. , Vetting, M.W.

Primary Citation of Related Structures: 5TRD


Proteins
Molecule Chains Sequence Length Organism Sequence
Riboflavin kinase A 230 Achromobacter Denitrificans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSLETDDQYYRAIKKIKEAAEASNRAYLTSSKLADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITEKGLDVLYTEFADLSRILAIKNNVVITGTVTSGMGEGRYYVARKQYIIQFQEKLGIIPYLGTLNIKVDQASLPELRKIRGFRGIHIEGFKTEDRTFGSVKAFPAKIQNIPCFVIMPERTVYTDVIEIISDKYLREEINLHDGDRVSVEVYTEGHHHHHH
Riboflavin kinase B 230 Achromobacter Denitrificans , Rhodobacter Sphaeroides (Strain Atcc 17023 / Dsm 158 / Jcm 6121 / Nbrc 12203 / Ncimb 8253 / Ath 2.4.1.) MSLETDDQYYRAIKKIKEAAEASNRAYLTSSKLADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITEKGLDVLYTEFADLSRILAIKNNVVITGTVTSGMGEGRYYVARKQYIIQFQEKLGIIPYLGTLNIKVDQASLPELRKIRGFRGIHIEGFKTEDRTFGSVKAFPAKIQNIPCFVIMPERTVYTDVIEIISDKYLREEINLHDGDRVSVEVYTEGHHHHHH

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
DNA (5'-D(*AP*TP*TP*AP*CP*TP*AP*AP*TP*TP*CP*AP*CP*GP*AP*GP*TP*AP*A)-3') g 19 NA ATTACTAATTCACGAGTAA
DNA (5'-D(P*TP*TP*TP*AP*CP*TP*CP*GP*TP*GP*AP*AP*TP*TP*AP*GP*TP*AP*A)-3') h 19 NA TTTACTCGTGAATTAGTAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-10-26
Deposition Author(s): Almo, S.C. , Li, X. , Osterman, A.L. , Rodionov, D.A. , Rodionova, I.A. , Vetting, M.W.