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5TKJ

Structure of vaccine-elicited diverse hiv-1 neutralizing antibody vfp1.01 in complex with hiv-1 fusion peptide residue 512-519

PDB DOI: 10.2210/pdb5tkj/pdb

Classification: IMMUNE SYSTEM
Organism(s): Mus Musculus , Synthetic Construct

Deposited: 2016-10-06
Deposition Author(s): Kwong, P.D. , Liu, K. , Xu, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.118 Å

5tkj
Literature

Structure of vaccine-elicited diverse hiv-1 neutralizing antibody vfp1.01 in complex with hiv-1 fusion peptide residue 512-519

Kwong, P.D. , Liu, K. , Xu, K.

Primary Citation of Related Structures: 5TKJ


Proteins
Molecule Chains Sequence Length Organism Sequence
vFP1.01 chimeric mouse antibody heavy chain A 221 Mus Musculus , Synthetic Construct QVQLQQSGTELVWPGTSVTLSCKASGYTFTDYEIHWVKQTPVHGLEWIGAIVPKTGYTAYNQKFRGKAILTADKSSSTAYMDLRRLTSEDSAVYYCTRLRNYWYFDVWGTGTTVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
vFP1.01 chimeric mouse antibody heavy chain D 221 Mus Musculus , Synthetic Construct QVQLQQSGTELVWPGTSVTLSCKASGYTFTDYEIHWVKQTPVHGLEWIGAIVPKTGYTAYNQKFRGKAILTADKSSSTAYMDLRRLTSEDSAVYYCTRLRNYWYFDVWGTGTTVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
vFP1.01 chimeric mouse antibody heavy chain G 221 Mus Musculus , Synthetic Construct QVQLQQSGTELVWPGTSVTLSCKASGYTFTDYEIHWVKQTPVHGLEWIGAIVPKTGYTAYNQKFRGKAILTADKSSSTAYMDLRRLTSEDSAVYYCTRLRNYWYFDVWGTGTTVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
vFP1.01 chimeric mouse antibody heavy chain J 221 Mus Musculus , Synthetic Construct QVQLQQSGTELVWPGTSVTLSCKASGYTFTDYEIHWVKQTPVHGLEWIGAIVPKTGYTAYNQKFRGKAILTADKSSSTAYMDLRRLTSEDSAVYYCTRLRNYWYFDVWGTGTTVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
vFP1.01 chimeric mouse antibody light chain B 219 Mus Musculus , Synthetic Construct DFLMAQTPLSLPVSLGDQASISCRSSQSIVYSDGNTYLEWYLQRPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGIYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
vFP1.01 chimeric mouse antibody light chain E 219 Mus Musculus , Synthetic Construct DFLMAQTPLSLPVSLGDQASISCRSSQSIVYSDGNTYLEWYLQRPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGIYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
vFP1.01 chimeric mouse antibody light chain H 219 Mus Musculus , Synthetic Construct DFLMAQTPLSLPVSLGDQASISCRSSQSIVYSDGNTYLEWYLQRPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGIYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
vFP1.01 chimeric mouse antibody light chain K 219 Mus Musculus , Synthetic Construct DFLMAQTPLSLPVSLGDQASISCRSSQSIVYSDGNTYLEWYLQRPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGIYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
HIV-1 fusion peptide residue 512-519 C 8 Mus Musculus , Synthetic Construct AVGIGAVF
HIV-1 fusion peptide residue 512-519 F 8 Mus Musculus , Synthetic Construct AVGIGAVF
HIV-1 fusion peptide residue 512-519 I 8 Mus Musculus , Synthetic Construct AVGIGAVF
HIV-1 fusion peptide residue 512-519 L 8 Mus Musculus , Synthetic Construct AVGIGAVF
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-10-06
Deposition Author(s): Kwong, P.D. , Liu, K. , Xu, K.