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FASTA Sequence PDB Format mmCIF Format
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5THE

Crystal structure of the c-terminal lobe of a budding yeast argonaute

PDB DOI: 10.2210/pdb5the/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Nostoc Sp. (Strain Pcc 7120 / Utex 2576) , Rhodobacter Sphaeroides

Deposited: 2016-09-29
Deposition Author(s): Dayeh, D.M. , Nakanishi, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.097 Å

5the
Literature

Crystal structure of the c-terminal lobe of a budding yeast argonaute

Dayeh, D.M. , Nakanishi, K.

Primary Citation of Related Structures: 5THE


Proteins
Molecule Chains Sequence Length Organism Sequence
Uncharacterized protein A 549 Nostoc Sp. (Strain Pcc 7120 / Utex 2576) , Rhodobacter Sphaeroides SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKKFQGGGRGGRGGRGSRGGRGGRGAPSGPPTFETSPGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAPKEKGSKDQPTVSKNVLLPQVNDNIKSVMYYI
Uncharacterized protein C 549 Nostoc Sp. (Strain Pcc 7120 / Utex 2576) , Rhodobacter Sphaeroides SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKKFQGGGRGGRGGRGSRGGRGGRGAPSGPPTFETSPGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAPKEKGSKDQPTVSKNVLLPQVNDNIKSVMYYI
Uncharacterized protein E 549 Nostoc Sp. (Strain Pcc 7120 / Utex 2576) , Rhodobacter Sphaeroides SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKKFQGGGRGGRGGRGSRGGRGGRGAPSGPPTFETSPGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAPKEKGSKDQPTVSKNVLLPQVNDNIKSVMYYI
Uncharacterized protein G 549 Nostoc Sp. (Strain Pcc 7120 / Utex 2576) , Rhodobacter Sphaeroides SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKKFQGGGRGGRGGRGSRGGRGGRGAPSGPPTFETSPGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAPKEKGSKDQPTVSKNVLLPQVNDNIKSVMYYI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*AP*AP*AP*AP*AP*AP*A)-3') b 8 NA UAAAAAAA
RNA (5'-R(P*UP*AP*AP*AP*AP*AP*AP*A)-3') d 8 NA UAAAAAAA
RNA (5'-R(P*UP*AP*AP*AP*AP*AP*AP*A)-3') f 8 NA UAAAAAAA
RNA (5'-R(P*UP*AP*AP*AP*AP*AP*AP*A)-3') h 8 NA UAAAAAAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-09-29
Deposition Author(s): Dayeh, D.M. , Nakanishi, K.