PDBi (Protein Data Bank in India)

All in One Protein Databank
Home About Help Resources External Links Contact Us
Advanced Search
FASTA Sequence PDB Format mmCIF Format
FASTA Sequence PDB Format PDB Format(gz) PDBx/mmCIF Format PDBx/mmCIF Format(gz) PDBML/XML Format Validation Full PDF Validation CIF

5THE

Crystal structure of the c-terminal lobe of a budding yeast argonaute

PDB DOI: 10.2210/pdb5the/pdb

Classification: RNA BINDING PROTEIN/RNA
Organism(s): Escherichia Coli Bl21(De3) , Vanderwaltozyma Polyspora

Deposited: 2016-09-29
Deposition Author(s): Dayeh, D.M. , Nakanishi, K.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.097 Å

Literature

Crystal structure of the c-terminal lobe of a budding yeast argonaute

Dayeh, D.M. , Nakanishi, K.

Primary Citation of Related Structures: 5THE


Proteins
Molecule Chains Sequence Length Organism Sequence
Uncharacterized protein A 549 Escherichia Coli Bl21(De3) , Vanderwaltozyma Polyspora SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKKFQGGGRGGRGGRGSRGGRGGRGAPSGPPTFETSPGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAPKEKGSKDQPTVSKNVLLPQVNDNIKSVMYYI
Uncharacterized protein C 549 Escherichia Coli Bl21(De3) , Vanderwaltozyma Polyspora SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKKFQGGGRGGRGGRGSRGGRGGRGAPSGPPTFETSPGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAPKEKGSKDQPTVSKNVLLPQVNDNIKSVMYYI
Uncharacterized protein E 549 Escherichia Coli Bl21(De3) , Vanderwaltozyma Polyspora SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKKFQGGGRGGRGGRGSRGGRGGRGAPSGPPTFETSPGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAPKEKGSKDQPTVSKNVLLPQVNDNIKSVMYYI
Uncharacterized protein G 549 Escherichia Coli Bl21(De3) , Vanderwaltozyma Polyspora SIYKVENRHDYGTKGTKVDILTGSGRVPSRILDAPVVQFKESTFEYKDKSYGTKHEESKGNWNMKGHQFISTPAKQVNLRAIFINNANTAPPASMESELDISMDKFASDVKQLGVDFNVSGKPILINQFGPPIKKFQGGGRGGRGGRGSRGGRGGRGAPSGPPTFETSPGEISLLNLLENIPSNTYILYVLRRGNDSAVYDRLKYITDLKFGALNSCVVWDNFKKNSIQYNSNVVMKMNLKLLGSNHSLSIENNKLLIDKESNLPILVLGSDVTHYPEKDQNSIASLVGSYDDKFTQFPGDYMLQDGPGEEIITNVGSLMLNRLKIYQKHNNGKLPTKIMYFRDGVSVDQFSQVVKIEVKSIKESVRKFGPQLNGGNKYDPPVTCIATVKRNQVRFIPIQENAKNEKGEEVAVQSMGNVMPGTVVDRGITSVAHFDFFIQSHQALKGTGVPCHYWCLYDENQSTSDYLQEICNNLCYIFGRSTTSVKVPAPVYYADLLCTRATCFFKAGFELNMAQAPKEKGSKDQPTVSKNVLLPQVNDNIKSVMYYI

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
RNA (5'-R(P*UP*AP*AP*AP*AP*AP*AP*A)-3') b 8 NA UAAAAAAA
RNA (5'-R(P*UP*AP*AP*AP*AP*AP*AP*A)-3') d 8 NA UAAAAAAA
RNA (5'-R(P*UP*AP*AP*AP*AP*AP*AP*A)-3') f 8 NA UAAAAAAA
RNA (5'-R(P*UP*AP*AP*AP*AP*AP*AP*A)-3') h 8 NA UAAAAAAA
Experimental Data

Method: X-RAY DIFFRACTION

Deposited Date: 2016-09-29
Deposition Author(s): Dayeh, D.M. , Nakanishi, K.