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FASTA Sequence PDB Format mmCIF Format
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5TC1

In situ structures of the genome and genome-delivery apparatus in ssrna bacteriophage ms2

PDB DOI: 10.2210/pdb5tc1/pdb

Classification: viral protein/rna
Organism(s): Enterobacteria Phage Ms2

Deposited: 2016-09-13
Deposition Author(s): Dai, X.H. , Du, Y.S. , Lai, M. , Li, Z.H. , Shu, S. , Sun, R. , Zhou, Z.H.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

5tc1
Literature

In situ structures of the genome and genome-delivery apparatus in ssrna bacteriophage ms2

Dai, X.H. , Du, Y.S. , Lai, M. , Li, Z.H. , Shu, S. , Sun, R. , Zhou, Z.H.

Primary Citation of Related Structures: 5TC1


Proteins
Molecule Chains Sequence Length Organism Sequence
Capsid protein A 130 Enterobacteria Phage Ms2 MASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Capsid protein B 130 Enterobacteria Phage Ms2 MASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Capsid protein C 130 Enterobacteria Phage Ms2 MASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Capsid protein D 130 Enterobacteria Phage Ms2 MASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Capsid protein E 130 Enterobacteria Phage Ms2 MASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Capsid protein F 130 Enterobacteria Phage Ms2 MASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Capsid protein G 130 Enterobacteria Phage Ms2 MASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Capsid protein H 130 Enterobacteria Phage Ms2 MASNFTQFVLVDNGGTGDVTVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSAQNRKYTIKVEVPKVATQTVGGVELPVAAWRSYLNMELTIPIFATNSDCELIVKAMQGLLKDGNPIPSAIAANSGIY
Maturation protein M 393 Enterobacteria Phage Ms2 MRAFSTLDRENETFVPSVRVYADGETEDNSFSLKYRSNWTPGRFNSTGAKTKQWHYPSPYSRGALSVTSIDQGAYKRSGSSWGRPYEEKAGFGFSLDARSCYSLFPVSQNLTYIEVPQNVANRASTEVLQKVTQGNFNLGVALAEARSTASQLATQTIALVKAYTAARRGNWRQALRYLALNEDRKFRSKHVAGRWLELQFGWLPLMSDIQGAYEMLTKVHLQEFLPMRAVRQVGTNIKLDGRLSYPAANFQTTCNISRRIVIWFYINDARLAWLSSLGILNPLGIVWEKVPFSFVVDWLLPVGNMLEGLTAPVGCSYMSGTVTDVITGESIISVDAPYGWTVERQGTAKAQISAMHRGVQSVWPTTGAYVKSPFSMVHTLDALALIRQRLSR

Nucleic Acids / Hybrid
Molecule Chains Sequence Length Organism Sequence
phage MS2 genome r 3569 NA GGGUGGGACCCCUUUCGGGGUCCUGCUCAACUUCCUGUCGAGCUAAUGCCAUUUUUAAUGUCUUUAGCGAGACGCUACCAUGGCUAUCGCUGUAGGUAGCCGGAAUUCCAUUCCUAGGAGGUUUGACCUGUGCGAGCUUUUAGUACCCUUGAUAGGGAGAACGAGACCUUCGUCCCCUCCGUUCGCGUUUACGCGGACGGUGAGACUGAAGAUAACUCAUUCUCUUUAAAAUAUCGUUCGAACUGGACUCCCGGUCGUUUUAACUCGACUGGGGCCAAAACGAAACAGUGGCACUACCCCUCUCCGUAUUCACGGGGGGCGUUAAGUGUCACAUCGAUAGAUCAAGGUGCCUACAAGCGAAGUGGGUCAUCGUGGGGUCGCCCGUACGAGGAGAAAGCCGGUUUCGGCUUCUCCCUCGACGCACGCUCCUGCUACAGCCUCUUCCCUGUAAGCCAAAACUUGACUUACAUCGAAGUGCCGCAGAACGUUGCGAACCGGGCGUCGACCGAAGUCCUGCAAAAGGUCACCCAGGGUAAUUUUAACCUUGGUGUUGCUUUAGCAGAGGCCAGGUCGACAGCCUCACAACUCGCGACGCAAACCAUUGCGCUCGUGAAGGCGUACACUGCCGCUCGUCGCGGUAAUUGGCGCCAGGCGCUCCGCUACCUUGCCCUAAACGAAGAUCGAAAGUUUCGAUCAAAACACGUGGCCGGCAGGUGGUUGGAGUUGCAGUUCGGUUGGUUACCACUAAUGAGUGAUAUCCAGGGUGCAUAUGAGAUGCUUACGAAGGUUCACCUUCAAGAGUUUCUUCCUAUGAGAGCCGUACGUCAGGUCGGUACUAACAUCAAGUUAGAUGGCCGUCUGUCGUAUCCAGCUGCAAACUUCCAGACAACGUGCAACAUAUCGCGACGUAUCGUGAUAUGGUUUUACAUAAACGAUGCACGUUUGGCAUGGUUGUCGUCUCUAGGUAUCUUGAACCCACUAGGUAUAGUGUGGGAAAAGGUGCCUUUCUCAUUCGUUGUCGACUGGCUCCUACCUGUAGGUAACAUGCUCGAGGGCCUUACGGCCCCCGUGGGAUGCUCCUACAUGUCAGGAACAGUUACUGACGUAAUAACGGGUGAGUCCAUCAUAAGCGUUGACGCUCCCUACGGGUGGACUGUGGAGAGACAGGGCACUGCUAAGGCCCAAAUCUCAGCCAUGCAUCGAGGGGUACAAUCCGUAUGGCCAACAACUGGCGCGUACGUAAAGUCUCCUUUCUCGAUGGUCCAUACCUUAGAUGCGUUAGCAUUAAUCAGGCAACGGCUCUCUAGAUAGAGCCCUCAACCGGAGUUUGAAGCAUGGCUUCUAACUUUACUCAGUUCGUUCUCGUCGACAAUGGCGGAACUGGCGACGUGACUGUCGCCCCAAGCAACUUCGCUAACGGGGUCGCUGAAUGGAUCAGCUCUAACUCGCGUUCACAGGCUUACAAAGUAACCUGUAGCGUUCGUCAGAGCUCUGCGCAGAAUCGCAAAUACACCAUCAAAGUCGAGGUGCCUAAAGUGGCAACCCAGACUGUUGGUGGUGUAGAGCUUCCUGUAGCCGCAUGGCGUUCGUACUUAAAUAUGGAACUAACCAUUCCAAUUUUCGCUACGAAUUCCGACUGCGAGCUUAUUGUUAAGGCAAUGCAAGGUCUCCUAAAAGAUGGAAACCCGAUUCCCUCAGCAAUCGCAGCAAACUCCGGCAUCUACUAAUAGACGCCGGCCAUUCAAACAUGAGGAUUACCCAUGUCGAAGACAACAAAGAAGUUCAACUCUUUAUGUAUUGAUCUUCCUCGCGAUCUUUCUCUCGAAAUUUACCAAUCAAUUGCUUCUGUCGCUACUGGAAGCGGUGAUCCGCACAGUGACGACUUUACAGCAAUUGCUUACUUAAGGGACGAAUUGCUCACAAAGCAUCCGACCUUAGGUUCUGGUAAUGACGAGGCGACCCGUCGUACCUUAGCUAUCGCUAAGCUACGGGAGGCGAAUGGUGAUCGCGGUCAGAUAAAUAGAGAAGGUUUCUUACAUGACAAAUCCUUGUCAUGGGAUCCGGAUGUUUUACAAACCAGCAUCCGUAGCCUUAUUGGCAACCUCCUCUCUGGCUACCGAUCGUCGUUGUUUGGGCAAUGCACGUUCUCCAACGGUGCUCCUAUGGGGCACAAGUUGCAGGAUGCAGCGCCUUACAAGAAGUUCGCUGAACAAGCAACCGUUACCCCCCGCGCUCUGAGAGCGGCUCUAUUGGUCCGAGACCAAUGUGCGCCGUGGAUCAGACACGCGGUCCGCUAUAACGAGUCAUAUGAAUUUAGGCUCGUUGUAGGGAACGGAGUGUUUACAGUUCCGAAGAAUAAUAAAAUAGAUCGGGCUGCCUGUAAGGAGCCUGAUAUGAAUAUGUACCUCCAGAAAGGGGUCGGUGCUUUCAUCAGACGCCGGCUCAAAUCCGUUGGUAUAGACCUGAAUGAUCAAUCGAUCAACCAGCGUCUGGCUCAGCAGGGCAGCGUAGAUGGUUCGCUUGCGACGAUAGACUUAUCGUCUGCAUCCGAUUCCAUCUCCGAUCGCCUGGUGUGGAGUUUUCUCCCACCAGAGCUAUAUUCAUAUCUCGAUCGUAUCCGCUCACACUACGGAAUCGUAGAUGGCGAGACGAUACGAUGGGAACUAUUUUCCACAAUGGGAAAUGGGUUCACAUUUGAGCUAGAGUCCAUGAUAUUCUGGGCAAUAGUCAAAGCGACCCAAAUCCAUUUUGGUAACGCCGGAACCAUAGGCAUCUACGGGGACGAUAUUAUAUGUCCCAGUGAGAUUGCACCCCGUGUGCUAGAGGCACUUGCCUACUACGGUUUUAAACCGAAUCUUCGUAAAACGUUCGUGUCCGGGCUCUUUCGCGAGAGCUGCGGCGCGCACUUUUACCGUGGUGUCGAUGUCAAACCGUUUUACAUCAAGAAACCUGUUGACAAUCUCUUCGCCCUGAUGCUGAUAUUAAAUCGGCUACGGGGUUGGGGAGUUGUCGGAGGUAUGUCAGAUCCACGCCUCUAUAAGGUGUGGGUACGGCUCUCCUCCCAGGUGCCUUCGAUGUUCUUCGGUGGGACGGACCUCGCUGCCGACUACUACGUAGUCAGCCCGCCUACGGCAGUCUCGGUAUACACCAAGACUCCGUACGGGCGGCUGCUCGCGGAUACCCGUACCUCGGGUUUCCGUCUUGCUCGUAUCGCUCGAGAACGCAAGUUCUUCAGCGAAAAGCACGACAGUGGUCGCUACAUAGCGUGGUUCCAUACUGGAGGUGAAAUCACCGACAGCAUGAAGUCCGCCGGCGUGCGCGUUAUACGCACUUCGGAGUGGCUAACGCCGGUUCCCACAUUCCCUCAGGAGUGUGGGCCAGCGAGCUCUCCUCGGUAGCUGACCGAGGGACCCCCGUAAACGGGGUGGGUGUGCUCGAAAGAGCACGGGUGCGAAAGCGGUCCGGCUCCACCGAAAGGUGGGCGGGCUUCGGCCCAGGGACCUCCCCCUAAAGAGAGGACCCGGGAUUCUCCCGAUUUGGUAACUAGCUGCUUGGCUAGUUACCACCCA
Experimental Data

Method: ELECTRON MICROSCOPY

Deposited Date: 2016-09-13
Deposition Author(s): Dai, X.H. , Du, Y.S. , Lai, M. , Li, Z.H. , Shu, S. , Sun, R. , Zhou, Z.H.